Variant report
| Variant | rs1862563 |
|---|---|
| Chromosome Location | chr5:58437527-58437528 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:58424000-58439800 | Weak transcription | Small Intestine | intestine |
| 2 | chr5:58424000-58447000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 3 | chr5:58424200-58446200 | Weak transcription | Fetal Intestine Large | intestine |
| 4 | chr5:58424200-58446600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 5 | chr5:58427200-58454000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 6 | chr5:58429800-58447200 | Weak transcription | Left Ventricle | heart |
| 7 | chr5:58430000-58442600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 8 | chr5:58431000-58440000 | Weak transcription | Fetal Lung | lung |
| 9 | chr5:58433000-58451600 | Weak transcription | Fetal Muscle Leg | muscle |
| 10 | chr5:58434800-58437800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 11 | chr5:58435000-58439600 | Genic enhancers | A549 | lung |
| 12 | chr5:58435200-58438000 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 13 | chr5:58435200-58439000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 14 | chr5:58435400-58442400 | Weak transcription | Hela-S3 | cervix |
| 15 | chr5:58435800-58437600 | Enhancers | Fetal Heart | heart |
| 16 | chr5:58436000-58439200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 17 | chr5:58437000-58438200 | Enhancers | Colon Smooth Muscle | Colon |
| 18 | chr5:58437200-58437800 | Enhancers | Psoas Muscle | Psoas |
| 19 | chr5:58437400-58438000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 20 | chr5:58437400-58439600 | Weak transcription | GM12878-XiMat | blood |
| 21 | chr5:58437400-58454000 | Weak transcription | Rectal Smooth Muscle | rectum |
