Variant report

Variant	rs186335374
Chromosome Location	chr2:181988202-181988203
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431824	chr2:181946115-182118559	ZNF genes & repeats Flanking Active TSS Weak transcription Enhancers Genic enhancers Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1005870	chr2:181968637-182921439	Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	nsv536063	chr2:181968637-182921439	Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
4	nsv459954	chr2:181975252-182040293	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv583910	chr2:181975252-182040293	ZNF genes & repeats Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
6	esv3431632	chr2:181987257-181989255	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island lncRNA	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:181981400-181988600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr2:181983600-181988400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr2:181985000-181988400	Enhancers	Primary T helper cells PMA-I stimulated	--
4	chr2:181985000-181988800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
5	chr2:181985000-181990200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr2:181985600-181988400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr2:181985800-181988400	Weak transcription	HMEC	breast
8	chr2:181985800-181988400	Weak transcription	NH-A	brain
9	chr2:181986200-181988400	Weak transcription	Primary T cells fromperipheralblood	blood
10	chr2:181986400-181988600	Weak transcription	HSMM	muscle
11	chr2:181986600-181989000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
12	chr2:181986800-181988400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
13	chr2:181987000-181988600	Weak transcription	HSMMtube	muscle
14	chr2:181987000-181988800	Enhancers	Primary T killer memory cells from peripheral blood	blood
15	chr2:181987400-181988400	Enhancers	Dnd41	blood
16	chr2:181987400-181989000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
17	chr2:181987600-181988400	Weak transcription	Primary T helper cells fromperipheralblood	blood
18	chr2:181987800-181988400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
19	chr2:181988000-181988400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
20	chr2:181988200-181988400	Flanking Active TSS	Primary T cells from cord blood	blood
21	chr2:181988200-181988400	Enhancers	Primary T helper naive cells from peripheral blood	blood
22	chr2:181988200-181988400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr2:181988200-181988600	Enhancers	Primary B cells from cord blood	blood
24	chr2:181988200-181988600	Enhancers	Muscle Satellite Cultured Cells	--

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