The 2.0 version of rSNPBase

Variant report

Variant rs186365341
Chromosome Location chr1:10657253-10657254
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10589400-10664800 Weak transcription Aorta Aorta
2 chr1:10603000-10659000 Weak transcription Primary B cells from cord blood blood
3 chr1:10605000-10659000 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr1:10628400-10661600 Weak transcription Primary T cells fromperipheralblood blood
5 chr1:10629800-10659000 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:10631800-10659200 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr1:10632600-10698000 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr1:10636600-10658000 Weak transcription Spleen Spleen
9 chr1:10637400-10659000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:10638400-10657400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:10638400-10661600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:10638600-10661600 Weak transcription Primary B cells from peripheral blood blood
13 chr1:10639800-10659200 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr1:10644200-10683400 Weak transcription K562 blood
15 chr1:10649400-10657800 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr1:10650000-10659200 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr1:10650200-10670600 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:10651200-10659200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:10651400-10658400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr1:10651400-10659000 Weak transcription Dnd41 blood
21 chr1:10651400-10659200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:10651400-10672800 Weak transcription Thymus Thymus
23 chr1:10651600-10715800 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr1:10652000-10657400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:10652000-10657600 Enhancers HUES48 Cell Line embryonic stem cell
26 chr1:10652000-10659000 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr1:10652000-10659000 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr1:10652200-10658400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:10652400-10657400 Weak transcription Adipose Nuclei Adipose
30 chr1:10652400-10657600 Weak transcription HSMMtube muscle
31 chr1:10652400-10658800 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr1:10652400-10661400 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr1:10652400-10678400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:10653400-10660800 Weak transcription Fetal Heart heart
35 chr1:10653600-10688600 Weak transcription Colon Smooth Muscle Colon
36 chr1:10654200-10658400 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr1:10654800-10661400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr1:10654800-10666200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr1:10654800-10691600 Weak transcription H9 Cell Line embryonic stem cell
40 chr1:10655000-10657400 Weak transcription H1 Cell Line embryonic stem cell
41 chr1:10655000-10657400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:10655000-10657400 Weak transcription HepG2 liver
43 chr1:10655000-10657600 Weak transcription Placenta Amnion Placenta Amnion
44 chr1:10655200-10657400 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr1:10655200-10657600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr1:10655200-10658000 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr1:10655400-10657600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr1:10655400-10658000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr1:10655600-10657400 Weak transcription Brain Germinal Matrix brain
50 chr1:10655600-10657400 Enhancers Fetal Intestine Small intestine

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Last update: Aug 31, 2015