Variant report

Variant	rs186436800
Chromosome Location	chr1:174160496-174160497
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:174158960..174161694-chr1:174164662..174167169,2	K562	blood:
2	chr1:174159869..174162419-chr1:174173364..174176167,2	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv872552	chr1:174061844-174469748	Strong transcription Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
2	nsv1008314	chr1:174080192-174311023	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
3	nsv535207	chr1:174080192-174311023	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
4	esv1799250	chr1:174119038-174484277	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
5	esv1800060	chr1:174132703-174501836	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
6	nsv465672	chr1:174133251-174469905	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
7	nsv548194	chr1:174133251-174469905	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
8	nsv946458	chr1:174149182-174160829	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
9	nsv470746	chr1:174150850-174469905	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
10	nsv825442	chr1:174160121-174162508	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:40 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:174129600-174164800	Weak transcription	Gastric	stomach
2	chr1:174129600-174173200	Weak transcription	Pancreas	Pancrea
3	chr1:174144000-174178200	Weak transcription	Left Ventricle	heart
4	chr1:174154200-174173600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr1:174159000-174163600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr1:174159200-174161000	Enhancers	Fetal Intestine Large	intestine
7	chr1:174159400-174161000	Enhancers	Small Intestine	intestine
8	chr1:174159600-174160600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr1:174159600-174161000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
10	chr1:174159600-174161000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
11	chr1:174159800-174160600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr1:174159800-174160600	Enhancers	Stomach Mucosa	stomach
13	chr1:174159800-174160800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
14	chr1:174159800-174160800	Enhancers	Primary T helper cells fromperipheralblood	blood
15	chr1:174159800-174161000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
16	chr1:174159800-174161000	Enhancers	Fetal Heart	heart
17	chr1:174159800-174161000	Flanking Active TSS	Hela-S3	cervix
18	chr1:174159800-174161000	Flanking Active TSS	NHEK	skin
19	chr1:174159800-174161200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr1:174159800-174170200	Weak transcription	Fetal Intestine Small	intestine
21	chr1:174160000-174160600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
22	chr1:174160000-174160800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr1:174160000-174160800	Enhancers	Primary T helper naive cells from peripheral blood	blood
24	chr1:174160000-174160800	Enhancers	Ovary	ovary
25	chr1:174160000-174161000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
26	chr1:174160000-174161000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr1:174160000-174161000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr1:174160000-174161000	Enhancers	Placenta Amnion	Placenta Amnion
29	chr1:174160000-174163200	Weak transcription	K562	blood
30	chr1:174160000-174163400	Weak transcription	Sigmoid Colon	Sigmoid Colon
31	chr1:174160000-174163600	Weak transcription	Dnd41	blood
32	chr1:174160000-174173600	Weak transcription	Primary B cells from peripheral blood	blood
33	chr1:174160200-174160800	Enhancers	GM12878-XiMat	blood
34	chr1:174160200-174161600	Enhancers	NHDF-Ad	bronchial
35	chr1:174160200-174163000	Weak transcription	Placenta	Placenta
36	chr1:174160200-174163200	Weak transcription	Right Atrium	heart
37	chr1:174160200-174163600	Weak transcription	Primary T cells fromperipheralblood	blood
38	chr1:174160400-174160600	Enhancers	Duodenum Mucosa	Duodenum
39	chr1:174160400-174160800	Weak transcription	Primary T helper cells PMA-I stimulated	--
40	chr1:174160400-174161000	Enhancers	NHLF	lung

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