| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv532159 |
chr5:88016214-88783092 |
Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
47 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv533373 |
chr5:88062497-89028098 |
Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
46 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv532160 |
chr5:88150666-88564477 |
Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
37 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv529543 |
chr5:88348147-88783092 |
Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
19 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv969283 |
chr5:88543694-88547168 |
Weak transcription Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015