Variant report

Variant	rs186551725
Chromosome Location	chr11:74784937-74784938
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr11:74784820-74784970	GM12866	blood:	n/a	n/a
2	CTCF	chr11:74784900-74785050	HMF	breast:	n/a	chr11:74785030-74785039
3	CTCF	chr11:74784882-74785232	K562	blood:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
4	CTCF	chr11:74784920-74785070	GM12865	blood:	n/a	chr11:74785030-74785039
5	RAD21	chr11:74784924-74785128	HepG2	liver:	n/a	chr11:74785064-74785078
6	CTCF	chr11:74784860-74785130	GM06990	blood:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
7	CTCF	chr11:74784920-74785070	AG09319	gingival:	n/a	chr11:74785030-74785039
8	CTCF	chr11:74784880-74785170	HVMF	connective:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
9	CTCF	chr11:74784908-74785271	HCT-116	colon:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
10	CTCF	chr11:74784880-74785030	A549	lung:	n/a	n/a
11	CTCF	chr11:74784847-74785241	K562	blood:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
12	CTCF	chr11:74784721-74785269	HCT-116	colon:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
13	CTCF	chr11:74784912-74785150	HepG2	liver:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
14	RAD21	chr11:74784889-74785160	H1-hESC	embryonic stem cell:	n/a	chr11:74785064-74785078
15	CTCF	chr11:74784880-74785030	GM12873	blood:	n/a	n/a
16	CTCF	chr11:74784920-74785070	HBMEC	blood vessel:	n/a	chr11:74785030-74785039
17	CTCF	chr11:74784888-74785171	MCF-7	breast:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
18	CTCF	chr11:74784920-74785070	HPF	lung:	n/a	chr11:74785030-74785039
19	CTCF	chr11:74784900-74785050	HFF-Myc	foreskin:	n/a	chr11:74785030-74785039
20	CTCF	chr11:74784921-74785278	MCF-7	breast:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
21	CTCF	chr11:74784875-74785147	H1-hESC	embryonic stem cell:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
22	CTCF	chr11:74784900-74785050	GM12869	blood:	n/a	chr11:74785030-74785039
23	CTCF	chr11:74784937-74785139	K562	blood:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
24	CTCF	chr11:74784915-74785142	A549	lung:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
25	CTCF	chr11:74784920-74785070	HRE	kidney:	n/a	chr11:74785030-74785039
26	POLR2A	chr11:74784784-74785032	K562	blood:	n/a	n/a
27	CTCF	chr11:74784900-74785050	HRE	kidney:	n/a	chr11:74785030-74785039
28	POLR2A	chr11:74784398-74787579	K562	blood:	n/a	n/a
29	CTCF	chr11:74784880-74785030	GM12867	blood:	n/a	n/a
30	RAD21	chr11:74784914-74785115	HepG2	liver:	n/a	chr11:74785064-74785078
31	CTCF	chr11:74784900-74785050	GM12874	blood:	n/a	chr11:74785030-74785039
32	CTCF	chr11:74784887-74785217	HepG2	liver:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
33	CTCF	chr11:74784908-74785209	H1-hESC	embryonic stem cell:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
34	CTCF	chr11:74784920-74785070	AG04449	skin:	n/a	chr11:74785030-74785039
35	RAD21	chr11:74784908-74785133	K562	blood:	n/a	chr11:74785064-74785078
36	CTCF	chr11:74784920-74785070	BE2_C	brain:	n/a	chr11:74785030-74785039
37	RAD21	chr11:74784812-74785216	H1-hESC	embryonic stem cell:	n/a	chr11:74785064-74785078
38	CTCF	chr11:74784900-74785050	HEK293	kidney:	n/a	chr11:74785030-74785039
39	CTCF	chr11:74784798-74785265	K562	blood:	n/a	chr11:74785062-74785075 chr11:74785030-74785039
40	CTCF	chr11:74784797-74785300	K562	blood:	n/a	chr11:74785062-74785075 chr11:74785030-74785039

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:74784418..74786926-chr11:74788706..74790951,2	K562	blood:
2	chr11:74733675..74734283-chr11:74784742..74785495,2	MCF-7	breast:

Variant related genes	Relation type
OR2AT2P	TF binding region

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897918	chr11:74757641-74798928	Enhancers Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
2	esv3478707	chr11:74782633-74842791	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
3	esv3478718	chr11:74782633-74842791	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74781400-74785000	Enhancers	K562	blood
2	chr11:74784800-74785400	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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