Variant report

Variant	rs186572244
Chromosome Location	chr5:74357006-74357007
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018865	chr5:74246293-74494552	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv882189	chr5:74356857-74478078	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:74350200-74357200	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr5:74350400-74360000	Enhancers	Fetal Thymus	thymus
3	chr5:74350600-74357400	Enhancers	Primary T cells fromperipheralblood	blood
4	chr5:74350800-74357200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
5	chr5:74350800-74357400	Enhancers	Primary T helper cells fromperipheralblood	blood
6	chr5:74350800-74359600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
7	chr5:74350800-74367600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr5:74352600-74357200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr5:74355600-74359000	Enhancers	Primary T killer memory cells from peripheral blood	blood
10	chr5:74355600-74359400	Enhancers	Primary T helper naive cells from peripheral blood	blood
11	chr5:74355600-74359600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
12	chr5:74355600-74360400	Enhancers	Primary T helper cells PMA-I stimulated	--
13	chr5:74355800-74359800	Enhancers	Primary T cells from cord blood	blood
14	chr5:74355800-74360200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
15	chr5:74356200-74359800	Enhancers	Thymus	Thymus
16	chr5:74356400-74358200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr5:74357000-74358200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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