Variant report

Variant	rs186618984
Chromosome Location	chr4:106919107-106919108
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014993	chr4:106796019-106980727	Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv522792	chr4:106895964-106982793	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv3405660	chr4:106918856-106919225	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:106907800-106925000	Weak transcription	Pancreas	Pancrea
2	chr4:106912400-106920800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr4:106913000-106919200	Weak transcription	Aorta	Aorta
4	chr4:106913000-106919600	Weak transcription	Right Atrium	heart
5	chr4:106916200-106919400	Weak transcription	Fetal Kidney	kidney
6	chr4:106916200-106922200	Weak transcription	Colon Smooth Muscle	Colon
7	chr4:106917000-106919200	Weak transcription	Psoas Muscle	Psoas
8	chr4:106917800-106920400	Enhancers	HepG2	liver
9	chr4:106918000-106919800	Enhancers	Fetal Intestine Small	intestine
10	chr4:106918400-106920000	Enhancers	K562	blood
11	chr4:106918400-106920600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr4:106918400-106921000	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr4:106918600-106919600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
14	chr4:106918800-106919200	Weak transcription	Fetal Intestine Large	intestine
15	chr4:106918800-106919400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr4:106919000-106919600	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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