Variant report

Variant	rs186630391
Chromosome Location	chr11:46855175-46855176
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:46852263..46856096-chr11:46860529..46864160,4	K562	blood:
2	chr11:46852561..46855680-chr11:46857184..46859158,3	MCF-7	breast:
3	chr11:46852283..46855775-chr11:46856226..46860913,6	MCF-7	breast:
4	chr11:46847421..46850333-chr11:46853966..46855875,2	MCF-7	breast:
5	chr11:46839503..46842068-chr11:46852399..46855233,2	K562	blood:
6	chr11:46851845..46855646-chr11:46855990..46859166,4	K562	blood:
7	chr11:46854582..46856841-chr11:46859610..46861252,2	K562	blood:

Variant related genes	Relation type
ENSG00000175216	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3513760	chr11:46854766-46855377	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3513761	chr11:46854766-46855377	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv3478397	chr11:46854846-46855437	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv3478408	chr11:46854942-46855363	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:46848400-46856800	Weak transcription	Small Intestine	intestine
2	chr11:46848400-46863800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr11:46848400-46866200	Weak transcription	Placenta	Placenta
4	chr11:46848800-46857600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr11:46848800-46862200	Weak transcription	Fetal Muscle Trunk	muscle
6	chr11:46848800-46865800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
7	chr11:46849000-46856400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr11:46849000-46856400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
9	chr11:46849000-46857000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr11:46849000-46857200	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr11:46849000-46858400	Weak transcription	Primary T helper cells PMA-I stimulated	--
12	chr11:46849000-46865200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
13	chr11:46849000-46865200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr11:46849000-46865800	Weak transcription	Primary hematopoietic stem cells	blood
15	chr11:46849000-46865800	Weak transcription	Thymus	Thymus
16	chr11:46849000-46866200	Weak transcription	Primary B cells from cord blood	blood
17	chr11:46849000-46866200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr11:46849000-46867000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr11:46849200-46859200	Weak transcription	Primary T helper cells fromperipheralblood	blood
20	chr11:46849200-46859800	Weak transcription	Primary T cells fromperipheralblood	blood
21	chr11:46849200-46860000	Weak transcription	Ovary	ovary
22	chr11:46849200-46860800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr11:46849200-46861000	Weak transcription	Fetal Thymus	thymus
24	chr11:46849200-46863600	Weak transcription	Fetal Muscle Leg	muscle
25	chr11:46849200-46864400	Weak transcription	Fetal Stomach	stomach
26	chr11:46849200-46866000	Weak transcription	NH-A	brain
27	chr11:46849200-46866200	Weak transcription	Brain Germinal Matrix	brain
28	chr11:46849200-46866600	Weak transcription	Psoas Muscle	Psoas
29	chr11:46849600-46860800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
30	chr11:46849600-46866000	Weak transcription	Cortex derived primary cultured neurospheres	brain
31	chr11:46849600-46866200	Weak transcription	HSMM	muscle
32	chr11:46849600-46866600	Weak transcription	Brain Angular Gyrus	brain
33	chr11:46849800-46857200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
34	chr11:46849800-46863000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr11:46850000-46859400	Weak transcription	GM12878-XiMat	blood
36	chr11:46850000-46863600	Weak transcription	HUVEC	blood vessel
37	chr11:46850000-46866000	Weak transcription	NHLF	lung
38	chr11:46850000-46866600	Weak transcription	Brain Inferior Temporal Lobe	brain
39	chr11:46850200-46857000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
40	chr11:46850200-46857400	Weak transcription	Duodenum Smooth Muscle	Duodenum
41	chr11:46850200-46859200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
42	chr11:46850200-46862600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr11:46850200-46864000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr11:46850200-46864800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
45	chr11:46850200-46865800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr11:46850400-46857400	Weak transcription	HUES6 Cell Line	embryonic stem cell
47	chr11:46850400-46861000	Weak transcription	NHDF-Ad	bronchial
48	chr11:46850400-46866000	Weak transcription	Muscle Satellite Cultured Cells	--
49	chr11:46850400-46866400	Weak transcription	Osteobl	bone
50	chr11:46851600-46857400	Weak transcription	A549	lung

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