Variant report

Variant	rs186649742
Chromosome Location	chrX:80068332-80068333
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916218	chrX:79377399-80230929	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	esv33127	chrX:79989618-80370141	Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	esv3384055	chrX:80067856-80127787	Enhancers Weak transcription Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:80066000-80068600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
2	chrX:80066200-80068400	Enhancers	Primary T cells from cord blood	blood
3	chrX:80066200-80068400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
4	chrX:80066200-80068400	Enhancers	Primary T killer memory cells from peripheral blood	blood
5	chrX:80066200-80068600	Enhancers	Primary monocytes fromperipheralblood	blood
6	chrX:80066800-80068400	Enhancers	Dnd41	blood
7	chrX:80067200-80068400	Enhancers	Primary B cells from cord blood	blood
8	chrX:80067200-80068400	Enhancers	Primary T helper naive cells from peripheral blood	blood
9	chrX:80067200-80068600	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chrX:80067800-80069000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chrX:80068000-80069800	Weak transcription	A549	lung
12	chrX:80068200-80068400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chrX:80068200-80070800	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chrX:80068200-80071000	Weak transcription	HUES64 Cell Line	embryonic stem cell
15	chrX:80068200-80071200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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