The 2.0 version of rSNPBase

Variant report

Variant rs186772799
Chromosome Location chr2:172565151-172565152
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172545000-172580200 Weak transcription Pancreas Pancrea
2 chr2:172545000-172580400 Weak transcription Spleen Spleen
3 chr2:172545000-172580800 Weak transcription Gastric stomach
4 chr2:172545200-172611200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr2:172545400-172588000 Weak transcription H9 Cell Line embryonic stem cell
6 chr2:172545800-172573000 Weak transcription H1 Cell Line embryonic stem cell
7 chr2:172545800-172575400 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:172545800-172588000 Weak transcription Right Ventricle heart
9 chr2:172546000-172567800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr2:172546000-172568600 Weak transcription Hela-S3 cervix
11 chr2:172546400-172574600 Weak transcription Right Atrium heart
12 chr2:172546600-172602800 Weak transcription Small Intestine intestine
13 chr2:172547000-172578600 Weak transcription Fetal Brain Male brain
14 chr2:172548200-172571800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr2:172548400-172579600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr2:172550200-172567800 Weak transcription Dnd41 blood
17 chr2:172551600-172584400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr2:172552200-172573400 Weak transcription Fetal Brain Female brain
19 chr2:172552200-172587600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr2:172554000-172580200 Weak transcription Aorta Aorta
21 chr2:172554400-172566200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr2:172554400-172588000 Weak transcription Esophagus oesophagus
23 chr2:172554600-172572000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr2:172554600-172572200 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr2:172554800-172580400 Weak transcription K562 blood
26 chr2:172555000-172566400 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr2:172555000-172571800 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr2:172555000-172571800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr2:172555000-172580200 Weak transcription Brain Anterior Caudate brain
30 chr2:172555600-172566400 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr2:172556800-172568600 Weak transcription Fetal Kidney kidney
32 chr2:172557000-172566200 Weak transcription Left Ventricle heart
33 chr2:172557000-172568600 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr2:172557000-172571800 Weak transcription Duodenum Mucosa Duodenum
35 chr2:172557400-172584400 Weak transcription Ovary ovary
36 chr2:172557600-172572200 Weak transcription Stomach Smooth Muscle stomach
37 chr2:172558000-172565200 Weak transcription Fetal Stomach stomach
38 chr2:172558000-172574600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr2:172558800-172571800 Weak transcription Liver Liver
40 chr2:172558800-172583400 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr2:172559000-172568000 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr2:172559000-172585000 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr2:172559600-172566200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr2:172559600-172567800 Weak transcription NHLF lung
45 chr2:172559600-172572000 Weak transcription GM12878-XiMat blood
46 chr2:172559600-172605200 Weak transcription Colonic Mucosa Colon
47 chr2:172559800-172566600 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr2:172559800-172571600 Weak transcription Primary hematopoietic stem cells blood
49 chr2:172559800-172571600 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr2:172559800-172571800 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015