Variant report

Variant	rs186815598
Chromosome Location	chr22:31089710-31089711
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr22:31057579..31060597-chr22:31088878..31091753,3	MCF-7	breast:
2	chr22:31062708..31065866-chr22:31088934..31092028,6	MCF-7	breast:
3	chr22:31062803..31066328-chr22:31088733..31092098,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000167065	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915818	chr22:30708245-31346302	Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
2	esv3356283	chr22:31089477-31092325	Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:31077400-31089800	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr22:31077400-31090000	Weak transcription	Fetal Heart	heart
3	chr22:31077600-31090000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr22:31086000-31089800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr22:31087600-31090000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr22:31087800-31089800	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr22:31087800-31090000	Weak transcription	NHDF-Ad	bronchial
8	chr22:31089200-31089800	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr22:31089200-31089800	Enhancers	Brain Germinal Matrix	brain
10	chr22:31089200-31089800	Enhancers	Fetal Brain Female	brain
11	chr22:31089200-31090000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr22:31089200-31090000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
13	chr22:31089400-31089800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr22:31089400-31089800	Enhancers	Brain Anterior Caudate	brain
15	chr22:31089400-31090000	Enhancers	Primary T helper cells PMA-I stimulated	--
16	chr22:31089400-31090000	Enhancers	Primary T helper cells fromperipheralblood	blood
17	chr22:31089400-31091600	Active TSS	Fetal Kidney	kidney
18	chr22:31089600-31089800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
19	chr22:31089600-31089800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr22:31089600-31089800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr22:31089600-31090000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
22	chr22:31089600-31090000	Enhancers	Primary hematopoietic stem cells	blood
23	chr22:31089600-31090000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
24	chr22:31089600-31090000	Enhancers	GM12878-XiMat	blood

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