Variant report

Variant	rs186854052
Chromosome Location	chr7:108899088-108899089
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831091	chr7:108756218-108923644	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv1018586	chr7:108759240-109034145	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv429794	chr7:108763098-109003574	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv1016803	chr7:108786402-109013227	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv539054	chr7:108786402-109013227	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
6	nsv831094	chr7:108806619-108981593	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
7	esv1849605	chr7:108882191-108913019	Flanking Active TSS Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv981407	chr7:108899006-108901283	Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:108898600-108902000	Enhancers	Dnd41	blood
2	chr7:108898800-108899400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr7:108898800-108899600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr7:108898800-108899600	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr7:108898800-108899600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr7:108898800-108899800	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr7:108898800-108899800	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr7:108898800-108899800	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr7:108898800-108899800	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr7:108899000-108899400	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr7:108899000-108899600	Enhancers	HUES6 Cell Line	embryonic stem cell
12	chr7:108899000-108899600	Enhancers	Brain Germinal Matrix	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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