Variant report

Variant	rs1868630
Chromosome Location	chr14:81051797-81051798
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12432505	1.00[YRI][hapmap]
rs12434618	1.00[YRI][hapmap]
rs17110752	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv902116	chr14:81018237-81082400	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81046400-81053600	Weak transcription	Thymus	Thymus
2	chr14:81046600-81053600	Weak transcription	Dnd41	blood
3	chr14:81049600-81052800	Enhancers	Hela-S3	cervix
4	chr14:81050600-81051800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr14:81050600-81052400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr14:81050800-81051800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr14:81050800-81051800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr14:81050800-81051800	Enhancers	Pancreatic Islets	Pancreatic Islet
9	chr14:81050800-81052800	Enhancers	HMEC	breast
10	chr14:81050800-81052800	Enhancers	NH-A	brain
11	chr14:81050800-81054600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr14:81051000-81051800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr14:81051000-81051800	Enhancers	HUVEC	blood vessel
14	chr14:81051000-81052000	Enhancers	NHLF	lung
15	chr14:81051000-81052200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr14:81051000-81052400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr14:81051000-81052400	Enhancers	NHEK	skin
18	chr14:81051200-81054200	Enhancers	Primary T cells from cord blood	blood
19	chr14:81051400-81052000	Enhancers	Fetal Intestine Small	intestine
20	chr14:81051400-81052000	Enhancers	Fetal Lung	lung
21	chr14:81051400-81052000	Enhancers	Stomach Mucosa	stomach
22	chr14:81051400-81052000	Flanking Active TSS	A549	lung
23	chr14:81051400-81052000	Enhancers	HSMMtube	muscle
24	chr14:81051400-81052400	Weak transcription	Fetal Intestine Large	intestine
25	chr14:81051400-81053600	Weak transcription	Osteobl	bone
26	chr14:81051600-81051800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr14:81051600-81052000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr14:81051600-81052000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr14:81051600-81052000	Enhancers	Colon Smooth Muscle	Colon
30	chr14:81051600-81052200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr14:81051600-81052800	Enhancers	Small Intestine	intestine
32	chr14:81051600-81053200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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