Variant report

Variant	rs186908115
Chromosome Location	chr11:108787106-108787107
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052254	chr11:108122683-108845008	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv541164	chr11:108122683-108845008	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
3	nsv898386	chr11:108409442-108831875	Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
4	nsv898389	chr11:108724639-108891986	Enhancers Active TSS ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
5	nsv39083	chr11:108786697-108792970	Weak transcription Strong transcription Enhancers	Chromatin interactive region lncRNA miRNA target site	n/a	inside rSNPs	n/a

No data

Chromatin state (count:47 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:108728400-108810600	Weak transcription	Left Ventricle	heart
2	chr11:108763000-108797600	Weak transcription	Fetal Muscle Leg	muscle
3	chr11:108768000-108810600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr11:108769000-108791200	Weak transcription	Primary B cells from peripheral blood	blood
5	chr11:108769200-108788600	Weak transcription	Primary T helper cells PMA-I stimulated	--
6	chr11:108769800-108789600	Weak transcription	Primary B cells from cord blood	blood
7	chr11:108775000-108794400	Weak transcription	Aorta	Aorta
8	chr11:108777200-108797000	Weak transcription	Psoas Muscle	Psoas
9	chr11:108778000-108799600	Weak transcription	HMEC	breast
10	chr11:108778200-108810600	Weak transcription	Ovary	ovary
11	chr11:108780600-108810600	Weak transcription	Pancreas	Pancrea
12	chr11:108780800-108790000	Weak transcription	Dnd41	blood
13	chr11:108781400-108787800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
14	chr11:108781600-108810400	Weak transcription	GM12878-XiMat	blood
15	chr11:108781800-108793200	Weak transcription	Primary hematopoietic stem cells	blood
16	chr11:108782200-108792000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr11:108783000-108810600	Weak transcription	Primary T cells fromperipheralblood	blood
18	chr11:108784200-108796600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr11:108784400-108793200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr11:108784400-108804000	Weak transcription	K562	blood
21	chr11:108785000-108787600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr11:108785000-108787600	Enhancers	A549	lung
23	chr11:108785000-108788400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr11:108785200-108807800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr11:108785600-108788200	Enhancers	Muscle Satellite Cultured Cells	--
26	chr11:108786000-108790200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
27	chr11:108786000-108793000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr11:108786200-108788200	Enhancers	Osteobl	bone
29	chr11:108786200-108789600	Weak transcription	Primary T cells from cord blood	blood
30	chr11:108786400-108788000	Enhancers	NH-A	brain
31	chr11:108786400-108810600	Weak transcription	Primary T helper cells fromperipheralblood	blood
32	chr11:108786800-108787200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
33	chr11:108786800-108787400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr11:108786800-108787600	Enhancers	NHEK	skin
35	chr11:108786800-108788000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr11:108786800-108788000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr11:108786800-108788000	Enhancers	HSMM	muscle
38	chr11:108786800-108788000	Enhancers	HUVEC	blood vessel
39	chr11:108786800-108788000	Enhancers	NHDF-Ad	bronchial
40	chr11:108787000-108787200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr11:108787000-108787200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr11:108787000-108787200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr11:108787000-108787400	Enhancers	Cortex derived primary cultured neurospheres	brain
44	chr11:108787000-108787400	Enhancers	Brain Germinal Matrix	brain
45	chr11:108787000-108787800	Enhancers	HSMMtube	muscle
46	chr11:108787000-108788000	Enhancers	NHLF	lung
47	chr11:108787000-108810800	Weak transcription	Duodenum Mucosa	Duodenum

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