Variant report

Variant	rs187016006
Chromosome Location	chr8:49173457-49173458
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831310	chr8:49080177-49256440	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv831311	chr8:49106160-49290209	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv1808901	chr8:49173411-49201882	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49166200-49173800	Weak transcription	Right Atrium	heart
2	chr8:49168000-49174000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:49170800-49173800	Weak transcription	Fetal Muscle Trunk	muscle
4	chr8:49171600-49173600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr8:49171600-49173800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr8:49172800-49175200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr8:49173000-49174200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr8:49173000-49175200	Enhancers	H1 Cell Line	embryonic stem cell
9	chr8:49173200-49175000	Enhancers	Adipose Nuclei	Adipose
10	chr8:49173200-49175200	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr8:49173200-49178800	Weak transcription	Spleen	Spleen
12	chr8:49173200-49182000	Weak transcription	Esophagus	oesophagus
13	chr8:49173400-49174000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr8:49173400-49174800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr8:49173400-49175000	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr8:49173400-49175000	Enhancers	Fetal Stomach	stomach
17	chr8:49173400-49175200	Enhancers	H9 Cell Line	embryonic stem cell
18	chr8:49173400-49175200	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr8:49173400-49175200	Enhancers	iPS-18 Cell Line	embryonic stem cell
20	chr8:49173400-49175400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr8:49173400-49175400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr8:49173400-49175800	Enhancers	iPS-15b Cell Line	embryonic stem cell
23	chr8:49173400-49186400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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