Variant report

Variant rs1870723
Chromosome Location chr11:640349-640350
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:616800-641200 Weak transcription K562 blood
2 chr11:617000-640400 Weak transcription Dnd41 blood
3 chr11:625800-642600 Weak transcription Hela-S3 cervix
4 chr11:626400-642000 Weak transcription HepG2 liver
5 chr11:628800-642600 Weak transcription A549 lung
6 chr11:633200-641000 Weak transcription HSMMtube muscle
7 chr11:636200-641000 Bivalent Enhancer Primary T cells fromperipheralblood blood
8 chr11:637000-643800 Weak transcription Aorta Aorta
9 chr11:637800-640800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
10 chr11:638000-640600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr11:638200-642000 Weak transcription Brain Angular Gyrus brain
12 chr11:638400-646600 Weak transcription Liver Liver
13 chr11:638800-640800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
14 chr11:638800-640800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr11:638800-642600 Weak transcription Muscle Satellite Cultured Cells --
16 chr11:639000-640400 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr11:639000-640400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr11:639000-640600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
19 chr11:639000-641600 Enhancers Spleen Spleen
20 chr11:639200-640400 Enhancers Primary hematopoietic stem cells blood
21 chr11:639200-640600 Active TSS iPS-15b Cell Line embryonic stem cell
22 chr11:639200-640600 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
23 chr11:639400-640400 Bivalent/Poised TSS Fetal Brain Female brain
24 chr11:639400-640400 Weak transcription NH-A brain
25 chr11:639400-640600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
26 chr11:639400-640800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr11:639400-640800 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
28 chr11:639400-641000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr11:639400-641600 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr11:639400-642600 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr11:639400-642600 Weak transcription NHDF-Ad bronchial
32 chr11:639400-644000 Weak transcription Brain Cingulate Gyrus brain
33 chr11:639400-650800 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr11:639400-655200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr11:639600-640400 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
36 chr11:639600-640400 Enhancers Esophagus oesophagus
37 chr11:639600-640400 Weak transcription Placenta Placenta
38 chr11:639600-640600 Active TSS H9 Cell Line embryonic stem cell
39 chr11:639600-641000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr11:639600-642600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr11:639600-642600 Weak transcription NHEK skin
42 chr11:639800-640400 Enhancers Primary hematopoietic stem cells short term culture blood
43 chr11:639800-641000 Weak transcription HSMM muscle
44 chr11:639800-641400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
45 chr11:639800-641800 Weak transcription Stomach Smooth Muscle stomach
46 chr11:639800-642600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr11:639800-642600 Weak transcription Duodenum Mucosa Duodenum
48 chr11:639800-642600 Weak transcription NHLF lung
49 chr11:639800-665600 Weak transcription Psoas Muscle Psoas
50 chr11:639800-673800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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