Variant report

Variant	rs187222078
Chromosome Location	chr10:44383783-44383784
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051921	chr10:44378011-44458880	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	esv3495236	chr10:44382596-44385094	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3387566	chr10:44382878-44384477	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3495062	chr10:44383204-44384213	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3495238	chr10:44383236-44384110	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3495233	chr10:44383248-44384172	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3495235	chr10:44383253-44384154	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3494840	chr10:44383256-44384183	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3494951	chr10:44383265-44384175	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3495234	chr10:44383286-44384139	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3495237	chr10:44383339-44384093	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3495173	chr10:44383343-44384091	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3495239	chr10:44383343-44384091	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44360000-44392200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44375800-44387400	Weak transcription	Left Ventricle	heart
3	chr10:44377600-44387600	Weak transcription	Right Atrium	heart
4	chr10:44377800-44383800	Weak transcription	HSMMtube	muscle
5	chr10:44378000-44383800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr10:44378200-44387000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr10:44380400-44386800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr10:44381200-44384600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr10:44382400-44384400	Weak transcription	Hela-S3	cervix
10	chr10:44382600-44389000	Enhancers	NHDF-Ad	bronchial
11	chr10:44383200-44385200	Enhancers	Muscle Satellite Cultured Cells	--
12	chr10:44383200-44388800	Enhancers	Osteobl	bone
13	chr10:44383400-44384800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr10:44383400-44388600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr10:44383400-44388800	Enhancers	NHLF	lung
16	chr10:44383400-44389000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links