Variant report

Variant rs187248724
Chromosome Location chr12:9559642-9559643
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:9544800-9593200 Weak transcription H9 Cell Line embryonic stem cell
2 chr12:9545400-9573800 Weak transcription Fetal Intestine Small intestine
3 chr12:9545400-9575600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr12:9549400-9564000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr12:9557400-9564200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr12:9557600-9559800 Enhancers Fetal Brain Male brain
7 chr12:9557600-9564200 Weak transcription Dnd41 blood
8 chr12:9557600-9572200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr12:9557800-9571400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr12:9558200-9560000 Active TSS Right Ventricle heart
11 chr12:9558600-9559800 Active TSS Fetal Brain Female brain
12 chr12:9558600-9559800 Active TSS Stomach Smooth Muscle stomach
13 chr12:9558600-9560000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
14 chr12:9558800-9559800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr12:9558800-9559800 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
16 chr12:9558800-9559800 Active TSS Brain Anterior Caudate brain
17 chr12:9558800-9559800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
18 chr12:9558800-9560000 Active TSS HUES64 Cell Line embryonic stem cell
19 chr12:9558800-9560000 Active TSS Psoas Muscle Psoas
20 chr12:9558800-9560200 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr12:9558800-9560200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr12:9558800-9560200 Active TSS Adipose Nuclei Adipose
23 chr12:9558800-9566600 Weak transcription Primary hematopoietic stem cells blood
24 chr12:9559000-9559800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
25 chr12:9559000-9559800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr12:9559000-9559800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
27 chr12:9559000-9559800 Active TSS Brain Cingulate Gyrus brain
28 chr12:9559000-9565800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr12:9559200-9559800 Enhancers H1 Cell Line embryonic stem cell
30 chr12:9559200-9559800 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
31 chr12:9559200-9560200 Active TSS Pancreatic Islets Pancreatic Islet
32 chr12:9559200-9560400 Enhancers Cortex derived primary cultured neurospheres brain
33 chr12:9559200-9564600 Weak transcription Primary T cells fromperipheralblood blood
34 chr12:9559200-9571000 Weak transcription Thymus Thymus
35 chr12:9559200-9599600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr12:9559400-9559800 Enhancers Colonic Mucosa Colon
37 chr12:9559400-9559800 Flanking Active TSS Placenta Placenta
38 chr12:9559400-9559800 Transcr. at gene 5' and 3' Fetal Stomach stomach
39 chr12:9559400-9559800 Active TSS Lung lung
40 chr12:9559400-9559800 Enhancers A549 lung
41 chr12:9559400-9560000 Active TSS iPS-15b Cell Line embryonic stem cell
42 chr12:9559600-9559800 Flanking Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr12:9559600-9559800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
44 chr12:9559600-9559800 Active TSS HUES6 Cell Line embryonic stem cell
45 chr12:9559600-9559800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
46 chr12:9559600-9559800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
47 chr12:9559600-9559800 Active TSS Duodenum Smooth Muscle Duodenum
48 chr12:9559600-9560000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr12:9559600-9560000 Active TSS Fetal Muscle Trunk muscle
50 chr12:9559600-9560000 Flanking Active TSS Fetal Muscle Leg muscle

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