Variant report

Variant	rs187403857
Chromosome Location	chr5:14772076-14772077
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:14768806..14770667-chr5:14771716..14774525,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018187	chr5:14385164-15127103	Strong transcription Flanking Bivalent TSS/Enh Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
2	nsv948447	chr5:14771247-14852610	Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:14729200-14791000	Weak transcription	Small Intestine	intestine
2	chr5:14744600-14775800	Weak transcription	NH-A	brain
3	chr5:14744800-14776000	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr5:14746000-14790200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr5:14746200-14775800	Weak transcription	Spleen	Spleen
6	chr5:14746600-14776000	Weak transcription	Placenta	Placenta
7	chr5:14749000-14776000	Weak transcription	Esophagus	oesophagus
8	chr5:14751400-14775800	Weak transcription	Pancreas	Pancrea
9	chr5:14752200-14776600	Weak transcription	Stomach Smooth Muscle	stomach
10	chr5:14753400-14775600	Weak transcription	Lung	lung
11	chr5:14753400-14777000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr5:14753600-14790000	Weak transcription	Ovary	ovary
13	chr5:14753600-14801600	Weak transcription	Rectal Smooth Muscle	rectum
14	chr5:14753800-14775800	Weak transcription	Gastric	stomach
15	chr5:14756800-14779000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
16	chr5:14756800-14780200	Weak transcription	Fetal Stomach	stomach
17	chr5:14756800-14781200	Weak transcription	Thymus	Thymus
18	chr5:14757400-14775800	Weak transcription	HMEC	breast
19	chr5:14758800-14783800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr5:14759200-14790200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr5:14761000-14776000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr5:14761000-14777800	Weak transcription	HSMMtube	muscle
23	chr5:14761400-14772200	Weak transcription	Aorta	Aorta
24	chr5:14761400-14772200	Weak transcription	Right Ventricle	heart
25	chr5:14761400-14775800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr5:14761600-14772400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
27	chr5:14761600-14773800	Weak transcription	Fetal Heart	heart
28	chr5:14761600-14776000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr5:14761800-14772800	Weak transcription	Brain Anterior Caudate	brain
30	chr5:14765200-14775800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr5:14766000-14773000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr5:14766600-14780000	Weak transcription	Fetal Intestine Large	intestine
33	chr5:14767400-14809800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
34	chr5:14768400-14776000	Weak transcription	Hela-S3	cervix
35	chr5:14768400-14789800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
36	chr5:14768600-14772200	Weak transcription	Brain Cingulate Gyrus	brain
37	chr5:14768600-14772600	Weak transcription	HepG2	liver
38	chr5:14768600-14773200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
39	chr5:14768600-14773600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
40	chr5:14768600-14773800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr5:14768600-14775600	Weak transcription	Rectal Mucosa Donor 29	rectum
42	chr5:14768600-14779400	Weak transcription	Primary T cells fromperipheralblood	blood
43	chr5:14768600-14790000	Weak transcription	Primary T helper cells PMA-I stimulated	--
44	chr5:14768600-14790200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
45	chr5:14768600-14790200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
46	chr5:14768600-14790200	Weak transcription	Dnd41	blood
47	chr5:14768800-14772400	Weak transcription	Brain Hippocampus Middle	brain
48	chr5:14768800-14772600	Weak transcription	Brain Germinal Matrix	brain
49	chr5:14768800-14775800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr5:14768800-14776000	Weak transcription	Adipose Nuclei	Adipose

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