The 2.0 version of rSNPBase

Variant report

Variant rs187407876
Chromosome Location chr12:26222253-26222254
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:26192400-26228600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr12:26197200-26228600 Weak transcription Aorta Aorta
3 chr12:26200800-26229000 Weak transcription Fetal Muscle Trunk muscle
4 chr12:26201000-26223400 Weak transcription Fetal Muscle Leg muscle
5 chr12:26201200-26234600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr12:26201600-26236200 Weak transcription Right Ventricle heart
7 chr12:26206800-26229600 Weak transcription Ovary ovary
8 chr12:26206800-26229800 Weak transcription Stomach Smooth Muscle stomach
9 chr12:26207400-26223600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr12:26207800-26224000 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr12:26207800-26224000 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr12:26208400-26234600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr12:26209600-26224800 Weak transcription Brain Anterior Caudate brain
14 chr12:26209600-26230400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr12:26211400-26227400 Weak transcription Placenta Placenta
16 chr12:26211600-26223800 Weak transcription Fetal Intestine Large intestine
17 chr12:26211600-26234600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr12:26211800-26230800 Weak transcription Fetal Lung lung
19 chr12:26212200-26223400 Weak transcription Colon Smooth Muscle Colon
20 chr12:26214400-26224800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr12:26215200-26230200 Weak transcription Adipose Nuclei Adipose
22 chr12:26215600-26222600 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr12:26215800-26230800 Weak transcription A549 lung
24 chr12:26216000-26226800 Weak transcription Hela-S3 cervix
25 chr12:26216000-26227600 Weak transcription HSMMtube muscle
26 chr12:26216000-26228800 Weak transcription HSMM muscle
27 chr12:26216000-26229200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr12:26216000-26230400 Weak transcription Psoas Muscle Psoas
29 chr12:26216000-26230600 Weak transcription HMEC breast
30 chr12:26216000-26230800 Weak transcription NHLF lung
31 chr12:26216000-26231000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr12:26216200-26230800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr12:26216200-26231000 Weak transcription NH-A brain
34 chr12:26216400-26223400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr12:26217000-26226200 Strong transcription NHDF-Ad bronchial
36 chr12:26217400-26222400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr12:26217800-26223400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr12:26218200-26224000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr12:26218200-26224000 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr12:26219800-26224000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr12:26220200-26222800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr12:26220200-26223200 Strong transcription Osteobl bone
43 chr12:26220600-26227600 Weak transcription Fetal Kidney kidney
44 chr12:26220800-26222400 Strong transcription Left Ventricle heart
45 chr12:26220800-26222400 Strong transcription HUVEC blood vessel
46 chr12:26220800-26222600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr12:26220800-26225000 Weak transcription Brain Substantia Nigra brain
48 chr12:26221000-26222600 Enhancers iPS-18 Cell Line embryonic stem cell
49 chr12:26221200-26222400 Enhancers iPS-15b Cell Line embryonic stem cell
50 chr12:26221400-26222400 Enhancers H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015