Variant report

Variant	rs187460223
Chromosome Location	chr1:150147360-150147361
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:150144466..150147427-chr1:150151082..150153149,2	K562	blood:
2	chr1:150054292..150057277-chr1:150145897..150147789,2	MCF-7	breast:
3	chr1:150036735..150038527-chr1:150146288..150147861,2	K562	blood:
4	chr1:150146767..150148436-chr1:150150182..150153003,2	MCF-7	breast:
5	chr1:150145555..150147909-chr1:150159184..150161241,2	K562	blood:
6	chr1:150136389..150137930-chr1:150144546..150147422,2	K562	blood:
7	chr1:150143512..150147427-chr1:150151082..150153697,4	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529719	chr1:150006344-150311095	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
2	nsv535153	chr1:150147218-150168829	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:150136400-150148800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr1:150138400-150157800	Weak transcription	Small Intestine	intestine
3	chr1:150141600-150148800	Weak transcription	GM12878-XiMat	blood
4	chr1:150141600-150150000	Weak transcription	Primary B cells from cord blood	blood
5	chr1:150141600-150158600	Weak transcription	Primary B cells from peripheral blood	blood
6	chr1:150143600-150148400	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr1:150145400-150153000	Weak transcription	Brain Substantia Nigra	brain
8	chr1:150145600-150148400	Weak transcription	Adipose Nuclei	Adipose
9	chr1:150145800-150150400	Weak transcription	Stomach Mucosa	stomach
10	chr1:150145800-150160000	Weak transcription	Right Atrium	heart
11	chr1:150146000-150148400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr1:150146000-150151800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr1:150146000-150159200	Weak transcription	HSMMtube	muscle
14	chr1:150146200-150149800	Weak transcription	Fetal Intestine Large	intestine
15	chr1:150146200-150153400	Weak transcription	Brain Anterior Caudate	brain
16	chr1:150146400-150148800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr1:150146400-150149200	Weak transcription	Fetal Intestine Small	intestine
18	chr1:150146600-150149800	Weak transcription	Duodenum Mucosa	Duodenum
19	chr1:150147000-150148600	Enhancers	Monocytes-CD14+_RO01746	blood
20	chr1:150147200-150159000	Enhancers	Primary monocytes fromperipheralblood	blood

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