The 2.0 version of rSNPBase

Variant report

Variant rs187675125
Chromosome Location chr11:10143145-10143146
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10122200-10144200 Weak transcription Left Ventricle heart
2 chr11:10122200-10156400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:10123200-10156400 Weak transcription Fetal Intestine Small intestine
4 chr11:10131200-10144200 Weak transcription Psoas Muscle Psoas
5 chr11:10131800-10143600 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr11:10137200-10161800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr11:10139000-10144200 Enhancers Hela-S3 cervix
8 chr11:10139800-10143400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr11:10139800-10144200 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr11:10139800-10144400 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr11:10140000-10143400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr11:10140000-10143400 Weak transcription HMEC breast
13 chr11:10140000-10143600 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr11:10140000-10143800 Weak transcription A549 lung
15 chr11:10140000-10144000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr11:10140000-10144200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr11:10140000-10144200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr11:10140000-10144200 Weak transcription HSMM muscle
19 chr11:10140000-10144200 Weak transcription NH-A brain
20 chr11:10140000-10156200 Weak transcription Fetal Lung lung
21 chr11:10140600-10144000 Weak transcription HSMMtube muscle
22 chr11:10140800-10143400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr11:10141200-10143600 Weak transcription Muscle Satellite Cultured Cells --
24 chr11:10141800-10143400 Weak transcription Osteobl bone
25 chr11:10141800-10144200 Weak transcription Primary hematopoietic stem cells blood
26 chr11:10142000-10143400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr11:10142000-10143400 Weak transcription NHLF lung
28 chr11:10142600-10143600 Enhancers HUES48 Cell Line embryonic stem cell
29 chr11:10142600-10144400 Enhancers Adipose Nuclei Adipose
30 chr11:10142600-10144800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr11:10142600-10145000 Enhancers NHDF-Ad bronchial
32 chr11:10142600-10145800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr11:10142800-10143400 Enhancers iPS-18 Cell Line embryonic stem cell
34 chr11:10142800-10143600 Enhancers HUES64 Cell Line embryonic stem cell
35 chr11:10142800-10143600 Enhancers Fetal Brain Female brain
36 chr11:10142800-10144400 Enhancers iPS-20b Cell Line embryonic stem cell
37 chr11:10142800-10145400 Enhancers ES-I3 Cell Line embryonic stem cell
38 chr11:10143000-10143200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr11:10143000-10143200 Enhancers Colon Smooth Muscle Colon
40 chr11:10143000-10143400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr11:10143000-10144000 Enhancers NHEK skin
42 chr11:10143000-10144800 Enhancers Ovary ovary
43 chr11:10143000-10144800 Enhancers Small Intestine intestine
44 chr11:10143000-10145000 Enhancers Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015