Variant report

Variant	rs187768725
Chromosome Location	chr14:39657115-39657116
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:39651767..39657982-chr14:39696424..39701629,5	MCF-7	breast:
2	chr14:39655012..39658223-chr14:39734448..39737542,3	MCF-7	breast:
3	chr14:39655760..39659371-chr14:39734225..39738994,7	K562	blood:
4	chr14:39655751..39657346-chr14:39681052..39683372,2	K562	blood:
5	chr14:39656147..39659470-chr14:39734225..39738099,6	K562	blood:
6	chr14:39571020..39573430-chr14:39654386..39657374,3	K562	blood:
7	chr14:39655421..39657718-chr14:39690495..39693068,2	K562	blood:
8	chr14:39654966..39657537-chr14:39669625..39671853,2	K562	blood:
9	chr14:39654966..39657894-chr14:39668988..39671853,2	K562	blood:
10	chr14:39599049..39601642-chr14:39656945..39658704,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000258651	Chromatin interaction
ENSG00000150527	Chromatin interaction
ENSG00000092208	Chromatin interaction
ENSG00000258940	Chromatin interaction
ENSG00000258941	Chromatin interaction
ENSG00000150526	Chromatin interaction
ENSG00000100934	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1246	chr14:39656597-39701520	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription	TF binding region Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:65 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:39645800-39657200	Strong transcription	HSMM	muscle
2	chr14:39647800-39658800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:39651000-39661600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
4	chr14:39651000-39662000	Weak transcription	Pancreas	Pancrea
5	chr14:39652400-39657200	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr14:39653000-39658000	Weak transcription	Fetal Lung	lung
7	chr14:39653000-39662000	Weak transcription	Primary hematopoietic stem cells	blood
8	chr14:39653200-39661600	Weak transcription	Right Ventricle	heart
9	chr14:39653400-39662000	Weak transcription	NHDF-Ad	bronchial
10	chr14:39653600-39658800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr14:39654000-39657200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr14:39654400-39657400	Weak transcription	Primary B cells from cord blood	blood
13	chr14:39654400-39657800	Weak transcription	Primary T helper cells PMA-I stimulated	--
14	chr14:39654400-39658400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr14:39654400-39658800	Weak transcription	Thymus	Thymus
16	chr14:39654400-39661600	Weak transcription	Left Ventricle	heart
17	chr14:39654400-39661800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
18	chr14:39654400-39661800	Weak transcription	Skeletal Muscle Male	skeletal muscle
19	chr14:39654400-39672000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr14:39654600-39657400	Weak transcription	Osteobl	bone
21	chr14:39654600-39657800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr14:39654600-39661600	Weak transcription	Psoas Muscle	Psoas
23	chr14:39654800-39658000	Weak transcription	Fetal Brain Female	brain
24	chr14:39654800-39658200	Weak transcription	Adipose Nuclei	Adipose
25	chr14:39654800-39659400	Weak transcription	Primary neutrophils fromperipheralblood	blood
26	chr14:39654800-39662000	Weak transcription	Liver	Liver
27	chr14:39655000-39657200	Weak transcription	NH-A	brain
28	chr14:39655000-39657600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr14:39655000-39658400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr14:39655000-39658800	Weak transcription	Stomach Smooth Muscle	stomach
31	chr14:39655200-39658000	Weak transcription	Placenta	Placenta
32	chr14:39655200-39658400	Weak transcription	Fetal Muscle Leg	muscle
33	chr14:39655200-39661600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
34	chr14:39655400-39657800	Weak transcription	Brain Germinal Matrix	brain
35	chr14:39655400-39661600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
36	chr14:39655400-39662800	Weak transcription	Fetal Intestine Small	intestine
37	chr14:39655800-39657200	Enhancers	HepG2	liver
38	chr14:39655800-39657600	Weak transcription	Fetal Muscle Trunk	muscle
39	chr14:39655800-39657800	Weak transcription	Fetal Thymus	thymus
40	chr14:39655800-39658000	Enhancers	iPS-15b Cell Line	embryonic stem cell
41	chr14:39656000-39657200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr14:39656000-39657800	Enhancers	HUES64 Cell Line	embryonic stem cell
43	chr14:39656200-39657600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr14:39656200-39657800	Enhancers	iPS-20b Cell Line	embryonic stem cell
45	chr14:39656200-39658000	Enhancers	iPS-18 Cell Line	embryonic stem cell
46	chr14:39656200-39658200	Enhancers	ES-I3 Cell Line	embryonic stem cell
47	chr14:39656400-39657200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
48	chr14:39656400-39657600	Enhancers	NHEK	skin
49	chr14:39656400-39657800	Enhancers	HUES6 Cell Line	embryonic stem cell
50	chr14:39656400-39657800	Enhancers	K562	blood

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