The 2.0 version of rSNPBase

Variant report

Variant rs187822074
Chromosome Location chrX:79989724-79989725
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chrX:79936600-80000200 Weak transcription Small Intestine intestine
2 chrX:79937000-80003600 Weak transcription Fetal Lung lung
3 chrX:79950400-80001600 Weak transcription Placenta Placenta
4 chrX:79950600-80012000 Weak transcription Muscle Satellite Cultured Cells --
5 chrX:79950800-80008200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chrX:79951600-80006000 Weak transcription Primary B cells from cord blood blood
7 chrX:79953400-80007600 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chrX:79954800-79991800 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chrX:79954800-80001400 Weak transcription Fetal Stomach stomach
10 chrX:79954800-80022200 Weak transcription Fetal Intestine Small intestine
11 chrX:79960200-80020600 Weak transcription Hela-S3 cervix
12 chrX:79965600-80034200 Weak transcription Left Ventricle heart
13 chrX:79966200-80001200 Weak transcription Sigmoid Colon Sigmoid Colon
14 chrX:79968000-80001600 Weak transcription Ovary ovary
15 chrX:79969200-79990600 Strong transcription HUES64 Cell Line embryonic stem cell
16 chrX:79969400-79989800 Strong transcription Monocytes-CD14+_RO01746 blood
17 chrX:79969600-79989800 Strong transcription Primary monocytes fromperipheralblood blood
18 chrX:79970400-79996800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chrX:79970400-79997800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chrX:79971400-79997600 Weak transcription Primary T cells from cord blood blood
21 chrX:79973000-80002800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chrX:79973200-79998000 Weak transcription Fetal Kidney kidney
23 chrX:79973200-80001000 Weak transcription H1 Cell Line embryonic stem cell
24 chrX:79973400-80000200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chrX:79975400-80002400 Weak transcription Brain Angular Gyrus brain
26 chrX:79976200-80002200 Weak transcription GM12878-XiMat blood
27 chrX:79978200-79998600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chrX:79978400-80001200 Weak transcription Rectal Mucosa Donor 29 rectum
29 chrX:79979600-80001400 Weak transcription Fetal Intestine Large intestine
30 chrX:79979600-80003600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chrX:79979600-80022400 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chrX:79980000-80002200 Weak transcription Liver Liver
33 chrX:79980600-80001000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chrX:79980800-79994200 Weak transcription Primary hematopoietic stem cells blood
35 chrX:79980800-80002000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chrX:79981000-79996200 Weak transcription HSMM muscle
37 chrX:79981000-79999400 Weak transcription Fetal Thymus thymus
38 chrX:79981600-79999400 Weak transcription Rectal Mucosa Donor 31 rectum
39 chrX:79981600-80012200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chrX:79982800-79989800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chrX:79982800-80011200 Weak transcription Pancreas Pancrea
42 chrX:79984200-79997400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chrX:79984400-79992400 Weak transcription Adipose Nuclei Adipose
44 chrX:79984400-79998600 Weak transcription Primary T helper cells PMA-I stimulated --
45 chrX:79984600-79999200 Weak transcription Duodenum Mucosa Duodenum
46 chrX:79985200-79999000 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chrX:79985400-80004200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chrX:79985800-79994200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chrX:79986400-80000000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chrX:79987800-79989800 Strong transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015