Variant report

Variant	rs187949620
Chromosome Location	chr12:26367783-26367784
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv648	chr12:26330291-26375186	Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv817432	chr12:26355515-26873664	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
3	esv1840338	chr12:26367307-26390319	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region lncRNA miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26358600-26368400	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr12:26358600-26379000	Weak transcription	Fetal Muscle Leg	muscle
3	chr12:26359200-26379600	Weak transcription	Aorta	Aorta
4	chr12:26359600-26379000	Weak transcription	Brain Angular Gyrus	brain
5	chr12:26360000-26368000	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr12:26360000-26372800	Weak transcription	Brain Hippocampus Middle	brain
7	chr12:26365000-26377400	Weak transcription	Brain Anterior Caudate	brain
8	chr12:26366000-26368600	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr12:26366000-26379400	Weak transcription	Ovary	ovary
10	chr12:26366600-26368000	Weak transcription	Fetal Heart	heart
11	chr12:26366600-26390600	Weak transcription	HSMMtube	muscle
12	chr12:26367400-26372800	Weak transcription	Psoas Muscle	Psoas
13	chr12:26367400-26379000	Weak transcription	Skeletal Muscle Female	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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