The 2.0 version of rSNPBase

Variant report

Variant rs187951055
Chromosome Location chr6:37146337-37146338
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37141000-37165000 Weak transcription Right Atrium heart
2 chr6:37142600-37159600 Weak transcription Fetal Heart heart
3 chr6:37143000-37147800 Weak transcription Colonic Mucosa Colon
4 chr6:37143200-37146800 Enhancers Primary hematopoietic stem cells blood
5 chr6:37143200-37147000 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr6:37143200-37148000 Weak transcription H9 Cell Line embryonic stem cell
7 chr6:37143200-37150600 Weak transcription Gastric stomach
8 chr6:37143200-37153000 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr6:37143400-37150400 Weak transcription Lung lung
10 chr6:37143400-37150600 Weak transcription Thymus Thymus
11 chr6:37143400-37150600 Weak transcription HepG2 liver
12 chr6:37143400-37155200 Weak transcription H1 Cell Line embryonic stem cell
13 chr6:37143400-37159600 Weak transcription Placenta Amnion Placenta Amnion
14 chr6:37143600-37146400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr6:37143600-37150600 Weak transcription Liver Liver
16 chr6:37143600-37150600 Weak transcription Fetal Muscle Trunk muscle
17 chr6:37143600-37150800 Weak transcription Stomach Smooth Muscle stomach
18 chr6:37143600-37151200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr6:37143600-37151800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr6:37143800-37146400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr6:37143800-37147800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr6:37143800-37148600 Weak transcription Brain Cingulate Gyrus brain
23 chr6:37143800-37150800 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr6:37143800-37151200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr6:37144000-37146400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr6:37144000-37146400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr6:37144000-37151200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr6:37144600-37146800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr6:37144600-37155000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr6:37144800-37148400 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr6:37145000-37146400 Enhancers Primary T helper cells PMA-I stimulated --
32 chr6:37145000-37147800 Weak transcription Dnd41 blood
33 chr6:37145000-37148600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr6:37145200-37150600 Weak transcription Spleen Spleen
35 chr6:37145200-37153400 Enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr6:37145400-37147400 Weak transcription Primary T cells fromperipheralblood blood
37 chr6:37145400-37147400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr6:37145400-37147600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr6:37145600-37162800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr6:37145800-37146400 Enhancers K562 blood
41 chr6:37145800-37146600 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr6:37145800-37147400 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr6:37145800-37149400 Weak transcription Primary T cells from cord blood blood
44 chr6:37145800-37150600 Weak transcription Adipose Nuclei Adipose
45 chr6:37145800-37150600 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr6:37145800-37150600 Weak transcription GM12878-XiMat blood
47 chr6:37145800-37159600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr6:37146000-37147600 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr6:37146000-37147600 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr6:37146000-37149000 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015