Variant report

Variant	rs187961586
Chromosome Location	chr4:55802773-55802774
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526344	chr4:55522488-56231119	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
2	nsv948758	chr4:55748430-55887962	Enhancers Flanking Active TSS Active TSS Weak transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv1010982	chr4:55802123-55808403	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:55796800-55810200	Weak transcription	Fetal Muscle Leg	muscle
2	chr4:55801000-55802800	Enhancers	Primary hematopoietic stem cells	blood
3	chr4:55801000-55802800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr4:55801200-55803600	Weak transcription	Stomach Mucosa	stomach
5	chr4:55801600-55804400	Enhancers	HUVEC	blood vessel
6	chr4:55802400-55803400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr4:55802400-55803600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr4:55802400-55803600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr4:55802600-55803600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr4:55802600-55807600	Weak transcription	Fetal Stomach	stomach
11	chr4:55802600-55808200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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