Variant report

Variant rs188089157
Chromosome Location chr4:3443197-3443198
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:3417200-3444800 Weak transcription Primary hematopoietic stem cells blood
2 chr4:3419200-3444600 Weak transcription Primary monocytes fromperipheralblood blood
3 chr4:3427000-3443200 Weak transcription Brain Substantia Nigra brain
4 chr4:3430800-3445200 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr4:3431800-3444600 Weak transcription Primary hematopoietic stem cells short term culture blood
6 chr4:3433000-3445200 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr4:3433200-3444800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr4:3433600-3444600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr4:3436400-3444400 Weak transcription Primary T cells from cord blood blood
10 chr4:3436400-3444400 Weak transcription Stomach Smooth Muscle stomach
11 chr4:3436400-3445200 Weak transcription Fetal Intestine Small intestine
12 chr4:3436600-3449000 Weak transcription Fetal Brain Female brain
13 chr4:3436800-3445400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr4:3437000-3450000 Weak transcription Brain Germinal Matrix brain
15 chr4:3437200-3451200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr4:3438000-3448000 Weak transcription Right Ventricle heart
17 chr4:3438600-3444800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr4:3438800-3445400 Weak transcription Gastric stomach
19 chr4:3439000-3445400 Weak transcription Pancreas Pancrea
20 chr4:3439200-3445400 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr4:3440400-3445200 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr4:3441000-3443200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr4:3441400-3443200 Enhancers Fetal Lung lung
24 chr4:3441400-3443800 Enhancers A549 lung
25 chr4:3441600-3443200 Enhancers NHEK skin
26 chr4:3441600-3443400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr4:3442400-3445600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr4:3442600-3443200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
29 chr4:3442600-3443200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr4:3442600-3443200 Enhancers Colonic Mucosa Colon
31 chr4:3442600-3443200 Enhancers Esophagus oesophagus
32 chr4:3442600-3443400 Enhancers Liver Liver
33 chr4:3442600-3443400 Bivalent Enhancer Placenta Placenta
34 chr4:3442600-3444200 Bivalent Enhancer Fetal Muscle Trunk muscle
35 chr4:3442800-3443200 Enhancers Osteobl bone
36 chr4:3442800-3443600 Flanking Active TSS HepG2 liver
37 chr4:3442800-3445000 Weak transcription HMEC breast
38 chr4:3443000-3443200 Enhancers Cortex derived primary cultured neurospheres brain
39 chr4:3443000-3443200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
40 chr4:3443000-3443400 Enhancers Spleen Spleen
41 chr4:3443000-3445200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr4:3443000-3446600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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