The 2.0 version of rSNPBase

Variant report

Variant rs188218120
Chromosome Location chr6:79648032-79648033
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:79639600-79650400 Weak transcription HSMMtube muscle
2 chr6:79640400-79655000 Weak transcription Brain Cingulate Gyrus brain
3 chr6:79640600-79648800 Weak transcription Fetal Kidney kidney
4 chr6:79641600-79650200 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr6:79642400-79649400 Weak transcription Adipose Nuclei Adipose
6 chr6:79642400-79650000 Weak transcription Muscle Satellite Cultured Cells --
7 chr6:79642400-79653000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr6:79642600-79649400 Weak transcription Brain Hippocampus Middle brain
9 chr6:79642600-79649400 Weak transcription Osteobl bone
10 chr6:79642600-79658200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr6:79642800-79649000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr6:79642800-79649400 Weak transcription Fetal Lung lung
13 chr6:79642800-79650400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr6:79643200-79648800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr6:79643200-79649000 Weak transcription GM12878-XiMat blood
16 chr6:79643200-79649400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr6:79643200-79653000 Weak transcription HMEC breast
18 chr6:79643600-79650200 Weak transcription Fetal Muscle Trunk muscle
19 chr6:79643600-79651600 Weak transcription Primary T cells from cord blood blood
20 chr6:79643800-79648800 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr6:79643800-79648800 Weak transcription Duodenum Mucosa Duodenum
22 chr6:79643800-79649000 Weak transcription Primary B cells from cord blood blood
23 chr6:79644000-79649400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr6:79644000-79658600 Strong transcription Dnd41 blood
25 chr6:79644400-79648800 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr6:79644400-79648800 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr6:79644400-79650200 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr6:79644400-79650400 Weak transcription Fetal Brain Male brain
29 chr6:79644400-79651600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr6:79644600-79649000 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr6:79644600-79649400 Weak transcription Fetal Intestine Large intestine
32 chr6:79644600-79649600 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr6:79644600-79654000 Weak transcription Brain Substantia Nigra brain
34 chr6:79644800-79655400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr6:79645000-79649600 Weak transcription Fetal Thymus thymus
36 chr6:79645000-79657400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr6:79645200-79648800 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr6:79645600-79648400 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr6:79645600-79653200 Weak transcription Rectal Smooth Muscle rectum
40 chr6:79645600-79658200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr6:79645600-79658600 Strong transcription HUES64 Cell Line embryonic stem cell
42 chr6:79645800-79648800 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr6:79645800-79650400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr6:79646000-79650200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr6:79646000-79652200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr6:79646000-79658000 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr6:79646000-79658400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr6:79646200-79649600 Weak transcription Primary T cells fromperipheralblood blood
49 chr6:79646200-79651200 Strong transcription HSMM muscle
50 chr6:79646200-79658200 Strong transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015