Variant report

Variant	rs1882626
Chromosome Location	chr2:144527388-144527389
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12691692	0.80[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];0.83[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.89[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7581136	0.89[CHB][hapmap];0.83[JPT][hapmap]
rs7607672	0.89[CHB][hapmap];0.83[JPT][hapmap]

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:144486800-144527600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr2:144520200-144527600	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr2:144520400-144527400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
4	chr2:144522400-144529800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr2:144522600-144527800	Strong transcription	Primary T cells from cord blood	blood
6	chr2:144523200-144529400	Strong transcription	Primary B cells from cord blood	blood
7	chr2:144523400-144528000	Strong transcription	Primary T cells fromperipheralblood	blood
8	chr2:144523800-144528000	Strong transcription	Dnd41	blood
9	chr2:144524000-144527400	Strong transcription	Primary T helper cells PMA-I stimulated	--
10	chr2:144524000-144527600	Weak transcription	Fetal Intestine Small	intestine
11	chr2:144524000-144530200	Weak transcription	Pancreas	Pancrea
12	chr2:144524200-144529000	Weak transcription	Fetal Lung	lung
13	chr2:144524600-144527600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
14	chr2:144524800-144528000	Strong transcription	Primary hematopoietic stem cells	blood
15	chr2:144525000-144528600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr2:144525000-144529000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
17	chr2:144525200-144527600	Strong transcription	Fetal Thymus	thymus
18	chr2:144525200-144527800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr2:144525200-144528000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr2:144525200-144528200	Strong transcription	Primary neutrophils fromperipheralblood	blood
21	chr2:144525200-144528200	Strong transcription	Monocytes-CD14+_RO01746	blood
22	chr2:144525400-144527400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
23	chr2:144525400-144527400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr2:144525400-144527400	Weak transcription	Left Ventricle	heart
25	chr2:144525400-144528000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
26	chr2:144526000-144528400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr2:144526200-144527600	Weak transcription	Spleen	Spleen
28	chr2:144526200-144527800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
29	chr2:144526200-144528800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
30	chr2:144526200-144529000	Weak transcription	GM12878-XiMat	blood
31	chr2:144526200-144530600	Weak transcription	Thymus	Thymus
32	chr2:144526600-144528200	Weak transcription	Primary monocytes fromperipheralblood	blood
33	chr2:144526600-144528400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
34	chr2:144526600-144528800	Weak transcription	Primary T helper cells fromperipheralblood	blood
35	chr2:144526800-144528400	Weak transcription	Primary B cells from peripheral blood	blood
36	chr2:144527000-144528600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
37	chr2:144527200-144528000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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