The 2.0 version of rSNPBase

Variant report

Variant rs188281817
Chromosome Location chr15:57226692-57226693
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57212400-57230400 Weak transcription Lung lung
2 chr15:57212400-57233400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr15:57212400-57256000 Weak transcription Pancreas Pancrea
4 chr15:57212600-57241000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr15:57212800-57227200 Weak transcription Fetal Muscle Trunk muscle
6 chr15:57213000-57227400 Weak transcription Placenta Amnion Placenta Amnion
7 chr15:57213200-57256000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr15:57213400-57226800 Weak transcription Brain Germinal Matrix brain
9 chr15:57215600-57227400 Weak transcription Fetal Brain Female brain
10 chr15:57216400-57241800 Weak transcription Fetal Brain Male brain
11 chr15:57220400-57226800 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr15:57220400-57236400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr15:57221400-57227200 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr15:57221800-57226800 Enhancers Brain Anterior Caudate brain
15 chr15:57222400-57227000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr15:57222400-57227400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr15:57222400-57229600 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr15:57222400-57231200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr15:57222600-57228800 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr15:57222600-57229000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr15:57222600-57231200 Weak transcription Osteobl bone
22 chr15:57222600-57231800 Weak transcription HSMM muscle
23 chr15:57222600-57233000 Weak transcription Right Ventricle heart
24 chr15:57222600-57250200 Weak transcription NH-A brain
25 chr15:57222800-57231800 Weak transcription Primary monocytes fromperipheralblood blood
26 chr15:57222800-57232600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr15:57222800-57240800 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr15:57222800-57255000 Weak transcription HMEC breast
29 chr15:57223000-57227400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr15:57223000-57236800 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr15:57223200-57227000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr15:57223200-57227400 Enhancers Brain Hippocampus Middle brain
33 chr15:57223200-57227400 Weak transcription Placenta Placenta
34 chr15:57223200-57230800 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr15:57223200-57240400 Weak transcription Aorta Aorta
36 chr15:57224200-57231000 Weak transcription NHDF-Ad bronchial
37 chr15:57224400-57227200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr15:57224400-57231200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr15:57224400-57231600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr15:57224400-57231800 Weak transcription Adipose Nuclei Adipose
41 chr15:57224400-57231800 Weak transcription Right Atrium heart
42 chr15:57224400-57234400 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr15:57224400-57235200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr15:57224400-57238000 Weak transcription Fetal Lung lung
45 chr15:57224600-57231000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr15:57224600-57231000 Weak transcription HepG2 liver
47 chr15:57224600-57231000 Weak transcription NHLF lung
48 chr15:57224600-57233800 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr15:57224600-57248600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr15:57225000-57226800 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015