Variant report

Variant	rs188356495
Chromosome Location	chr3:69881197-69881198
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3507784	chr3:69802539-69959607	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv3507785	chr3:69802539-69959607	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv21050	chr3:69881179-69881876	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv19391	chr3:69881179-69884045	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69870200-69886000	Weak transcription	Aorta	Aorta
2	chr3:69870600-69886200	Weak transcription	Colon Smooth Muscle	Colon
3	chr3:69873800-69887600	Weak transcription	NHLF	lung
4	chr3:69876400-69881200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr3:69879400-69881800	Weak transcription	Fetal Heart	heart
6	chr3:69879600-69884200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr3:69879600-69886000	Weak transcription	Right Atrium	heart
8	chr3:69879600-69886000	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr3:69881000-69881200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr3:69881000-69881200	Genic enhancers	Ovary	ovary
11	chr3:69881000-69881200	Enhancers	Pancreas	Pancrea
12	chr3:69881000-69881200	Enhancers	K562	blood
13	chr3:69881000-69881400	Enhancers	Brain Hippocampus Middle	brain
14	chr3:69881000-69881400	Enhancers	Left Ventricle	heart
15	chr3:69881000-69881600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr3:69881000-69881600	Enhancers	Psoas Muscle	Psoas
17	chr3:69881000-69881600	Enhancers	Right Ventricle	heart

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links