Variant report

Variant	rs188428267
Chromosome Location	chr14:79980876-79980877
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902110	chr14:79624492-79998294	Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1045241	chr14:79885361-80734201	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
3	nsv1039622	chr14:79908702-80266601	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv902112	chr14:79939393-80050771	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv1811223	chr14:79967761-79981954	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv1805690	chr14:79971835-79981954	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv1806121	chr14:79971835-79981954	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv1807999	chr14:79971835-79981954	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv1809543	chr14:79971835-79981954	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv1812098	chr14:79971835-79981954	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3509715	chr14:79979708-79981260	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	n/a
12	esv3509716	chr14:79979708-79981260	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	n/a
13	esv3523428	chr14:79980449-79982997	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
14	esv3326644	chr14:79980788-79981252	Weak transcription Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79975000-79982200	Weak transcription	Colon Smooth Muscle	Colon
2	chr14:79977200-79981200	Weak transcription	Osteobl	bone
3	chr14:79977400-79981200	Weak transcription	Stomach Smooth Muscle	stomach
4	chr14:79977600-79981000	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr14:79977800-79981000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr14:79977800-79981000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr14:79977800-79981200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr14:79977800-79981200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr14:79977800-79982200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr14:79978000-79981000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr14:79978000-79981000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr14:79978000-79981000	Weak transcription	HSMMtube	muscle
13	chr14:79978000-79981000	Weak transcription	NHLF	lung
14	chr14:79979200-79982800	Enhancers	Placenta Amnion	Placenta Amnion
15	chr14:79979600-79981000	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr14:79979600-79983400	Enhancers	Brain Germinal Matrix	brain
17	chr14:79980200-79981200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr14:79980600-79981400	Enhancers	NH-A	brain
19	chr14:79980600-79982400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr14:79980600-79982800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr14:79980600-79982800	Enhancers	HUES6 Cell Line	embryonic stem cell
22	chr14:79980600-79983000	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr14:79980800-79981200	Enhancers	iPS-15b Cell Line	embryonic stem cell
24	chr14:79980800-79982000	Enhancers	NHEK	skin
25	chr14:79980800-79982200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr14:79980800-79982400	Enhancers	HSMM	muscle

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