Variant report

Variant	rs188469788
Chromosome Location	chr13:96185413-96185414
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv900933	chr13:96138087-96215289	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Weak transcription Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv525760	chr13:96176034-96186575	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv3382990	chr13:96185012-96185533	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:96181200-96185800	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr13:96182600-96186400	Weak transcription	NH-A	brain
3	chr13:96182600-96187600	Weak transcription	HSMMtube	muscle
4	chr13:96182800-96185800	Weak transcription	HepG2	liver
5	chr13:96182800-96186000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr13:96183000-96185800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr13:96183000-96186000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr13:96183000-96186200	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr13:96183000-96187000	Weak transcription	HMEC	breast
10	chr13:96183000-96187200	Weak transcription	Hela-S3	cervix
11	chr13:96183000-96187400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr13:96183000-96188800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
13	chr13:96183000-96192800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr13:96183200-96185800	Weak transcription	HUVEC	blood vessel
15	chr13:96183400-96185800	Weak transcription	Pancreas	Pancrea
16	chr13:96183600-96187200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr13:96184200-96187200	Weak transcription	NHDF-Ad	bronchial
18	chr13:96184600-96186000	Weak transcription	Osteobl	bone
19	chr13:96184800-96186000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr13:96185000-96185600	Weak transcription	Fetal Kidney	kidney
21	chr13:96185000-96186000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
22	chr13:96185200-96185600	Weak transcription	A549	lung

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