Variant report

Variant	rs188490025
Chromosome Location	chr11:59615661-59615662
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825935	chr11:59615227-59626656	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv442233	chr11:59615391-59626011	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59613200-59616000	Weak transcription	Fetal Intestine Small	intestine
2	chr11:59613400-59616000	Weak transcription	Fetal Intestine Large	intestine
3	chr11:59614200-59619400	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr11:59614600-59616000	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr11:59614600-59622000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr11:59614600-59624800	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr11:59615200-59616200	Weak transcription	Stomach Mucosa	stomach
8	chr11:59615400-59616000	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr11:59615400-59616400	Weak transcription	K562	blood
10	chr11:59615600-59616000	Weak transcription	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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