The 2.0 version of rSNPBase

Variant report

Variant rs1885277
Chromosome Location chr1:67523784-67523785
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67520000-67524400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:67520200-67524000 Weak transcription Gastric stomach
3 chr1:67520400-67524000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:67520400-67524200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:67520400-67524200 Weak transcription HMEC breast
6 chr1:67520400-67524200 Weak transcription HSMM muscle
7 chr1:67520400-67524400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:67520400-67524400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:67520400-67524400 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:67520400-67525800 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr1:67520400-67526600 Weak transcription Pancreas Pancrea
12 chr1:67520600-67523800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:67520600-67523800 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr1:67520600-67523800 Weak transcription HepG2 liver
15 chr1:67520600-67524000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:67520600-67524000 Weak transcription Fetal Intestine Small intestine
17 chr1:67520600-67524000 Weak transcription Stomach Mucosa stomach
18 chr1:67520600-67524000 Weak transcription NHLF lung
19 chr1:67520600-67524200 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:67520600-67524200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:67520600-67524200 Weak transcription Muscle Satellite Cultured Cells --
22 chr1:67520600-67524200 Weak transcription Osteobl bone
23 chr1:67520600-67524400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:67520600-67524400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:67520600-67524400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:67520600-67524400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:67520600-67524400 Weak transcription HSMMtube muscle
28 chr1:67520600-67526000 Weak transcription A549 lung
29 chr1:67520600-67526200 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:67520800-67523800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:67520800-67523800 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr1:67520800-67524000 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr1:67520800-67524000 Weak transcription Liver Liver
34 chr1:67520800-67524000 Weak transcription Brain Substantia Nigra brain
35 chr1:67520800-67524200 Weak transcription K562 blood
36 chr1:67520800-67524400 Weak transcription NH-A brain
37 chr1:67520800-67524400 Weak transcription NHEK skin
38 chr1:67522200-67524000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:67522200-67524000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:67522400-67524000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:67523400-67525200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015