Variant report

Variant	rs1885605
Chromosome Location	chr14:81763898-81763899
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:81748293..81750025-chr14:81763811..81766768,2	MCF-7	breast:
2	chr14:81684606..81687320-chr14:81763608..81765468,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000165417	Chromatin interaction

rs_ID	r²[population]
rs1885603	0.86[CHB][hapmap]
rs2081988	0.86[CHB][hapmap]
rs4903978	0.86[CHB][hapmap]
rs5025110	0.86[CHB][hapmap]
rs8010339	0.94[ASN][1000 genomes]

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81741800-81768400	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr14:81743800-81778400	Weak transcription	Fetal Kidney	kidney
3	chr14:81745000-81769600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr14:81749800-81771400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr14:81754400-81777800	Weak transcription	Ovary	ovary
6	chr14:81755000-81769000	Weak transcription	Pancreas	Pancrea
7	chr14:81756600-81777400	Weak transcription	Fetal Muscle Leg	muscle
8	chr14:81757800-81768400	Weak transcription	K562	blood
9	chr14:81758200-81765000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr14:81759400-81773000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr14:81760200-81766400	Weak transcription	Fetal Intestine Small	intestine
12	chr14:81760200-81768400	Weak transcription	Placenta	Placenta
13	chr14:81760600-81767600	Weak transcription	Brain Anterior Caudate	brain
14	chr14:81761000-81767800	Weak transcription	Primary hematopoietic stem cells	blood
15	chr14:81762400-81765200	Enhancers	Primary hematopoietic stem cells short term culture	blood
16	chr14:81762800-81764000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr14:81763000-81767600	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr14:81763200-81767400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr14:81763200-81767600	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr14:81763200-81771600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr14:81763400-81764000	Enhancers	Psoas Muscle	Psoas
22	chr14:81763400-81764600	Weak transcription	HSMMtube	muscle
23	chr14:81763400-81764800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr14:81763400-81764800	Weak transcription	NHEK	skin
25	chr14:81763400-81767400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr14:81763600-81764800	Weak transcription	HMEC	breast
27	chr14:81763600-81767800	Weak transcription	Sigmoid Colon	Sigmoid Colon
28	chr14:81763600-81768400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
29	chr14:81763600-81769800	Weak transcription	Spleen	Spleen
30	chr14:81763800-81764400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr14:81763800-81767600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
32	chr14:81763800-81767600	Weak transcription	Primary monocytes fromperipheralblood	blood
33	chr14:81763800-81767800	Weak transcription	Stomach Mucosa	stomach
34	chr14:81763800-81767800	Weak transcription	Monocytes-CD14+_RO01746	blood

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