Variant report

Variant	rs188584807
Chromosome Location	chr9:8383411-8383412
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv8414	chr9:7827373-8511613	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv1031472	chr9:8250901-8712547	Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	nsv1022796	chr9:8360729-9110046	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
4	nsv526971	chr9:8382720-8388220	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:8339600-8397600	Weak transcription	Fetal Muscle Leg	muscle
2	chr9:8361400-8401600	Weak transcription	Fetal Muscle Trunk	muscle
3	chr9:8364800-8401600	Weak transcription	Brain Germinal Matrix	brain
4	chr9:8365000-8395400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr9:8365200-8386800	Weak transcription	Brain Anterior Caudate	brain
6	chr9:8365600-8386200	Weak transcription	Brain Angular Gyrus	brain
7	chr9:8365600-8386200	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr9:8367200-8394600	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr9:8367200-8399800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr9:8373000-8402200	Weak transcription	Fetal Kidney	kidney
11	chr9:8373600-8385800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr9:8374000-8394400	Weak transcription	Fetal Heart	heart
13	chr9:8374600-8386800	Weak transcription	Cortex derived primary cultured neurospheres	brain
14	chr9:8376600-8386800	Weak transcription	Brain Hippocampus Middle	brain
15	chr9:8376800-8386600	Weak transcription	Primary hematopoietic stem cells	blood
16	chr9:8376800-8393200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr9:8376800-8401800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr9:8377800-8406400	Weak transcription	Fetal Brain Female	brain
19	chr9:8381800-8383600	Enhancers	Aorta	Aorta
20	chr9:8382000-8383800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr9:8382000-8384400	Enhancers	Fetal Lung	lung
22	chr9:8382400-8383600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr9:8382400-8384800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr9:8383000-8383600	Enhancers	Brain Cingulate Gyrus	brain
25	chr9:8383000-8386800	Weak transcription	Ovary	ovary
26	chr9:8383400-8384200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr9:8383400-8387600	Weak transcription	Pancreas	Pancrea

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