Variant report

Variant rs188673141
Chromosome Location chr2:58387218-58387219
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:58315200-58389600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr2:58349000-58421200 Weak transcription Brain Substantia Nigra brain
3 chr2:58353800-58388200 Weak transcription Small Intestine intestine
4 chr2:58358200-58393800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr2:58358400-58389000 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr2:58359000-58387400 Weak transcription Fetal Muscle Trunk muscle
7 chr2:58359000-58391400 Weak transcription Fetal Muscle Leg muscle
8 chr2:58359000-58399000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr2:58359000-58454000 Weak transcription Stomach Smooth Muscle stomach
10 chr2:58359200-58395200 Weak transcription Fetal Stomach stomach
11 chr2:58359200-58399200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr2:58359400-58389400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr2:58359800-58392000 Weak transcription Placenta Amnion Placenta Amnion
14 chr2:58360800-58388600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr2:58363400-58399000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr2:58363600-58406800 Weak transcription Brain Hippocampus Middle brain
17 chr2:58365200-58390000 Weak transcription Psoas Muscle Psoas
18 chr2:58365600-58438000 Weak transcription Brain Cingulate Gyrus brain
19 chr2:58368200-58387400 Weak transcription NHLF lung
20 chr2:58368200-58403000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr2:58368200-58417000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr2:58368600-58399000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr2:58373800-58389600 Weak transcription Thymus Thymus
24 chr2:58374000-58389400 Weak transcription Right Ventricle heart
25 chr2:58374400-58393400 Weak transcription NHEK skin
26 chr2:58374400-58397400 Weak transcription Fetal Heart heart
27 chr2:58374600-58387400 Weak transcription HMEC breast
28 chr2:58379800-58389400 Strong transcription Primary B cells from cord blood blood
29 chr2:58380800-58387800 Weak transcription Fetal Brain Female brain
30 chr2:58380800-58398800 Weak transcription Spleen Spleen
31 chr2:58381000-58398800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr2:58381200-58391600 Weak transcription Brain Inferior Temporal Lobe brain
33 chr2:58381800-58390000 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr2:58382200-58388800 Strong transcription GM12878-XiMat blood
35 chr2:58382200-58390200 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr2:58382200-58393200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr2:58382400-58389200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr2:58382400-58390000 Strong transcription Adipose Nuclei Adipose
39 chr2:58382400-58390200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr2:58382400-58390400 Strong transcription Fetal Intestine Large intestine
41 chr2:58382400-58391800 Strong transcription Dnd41 blood
42 chr2:58382600-58390600 Strong transcription Liver Liver
43 chr2:58382600-58391400 Weak transcription Brain Angular Gyrus brain
44 chr2:58382600-58394000 Weak transcription Fetal Brain Male brain
45 chr2:58382600-58395400 Weak transcription Pancreas Pancrea
46 chr2:58382600-58395800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr2:58382600-58400200 Weak transcription Brain Germinal Matrix brain
48 chr2:58382600-58400400 Weak transcription Gastric stomach
49 chr2:58382800-58394400 Weak transcription ES-WA7 Cell Line embryonic stem cell
50 chr2:58382800-58395800 Weak transcription Lung lung

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