Variant report

Variant	rs188732144
Chromosome Location	chr17:46400946-46400947
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv575466	chr17:46391078-46402212	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv575467	chr17:46396831-46402212	Weak transcription Strong transcription Enhancers	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	esv11053	chr17:46400513-46402257	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv575468	chr17:46400536-46401318	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv575469	chr17:46400536-46401591	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv575470	chr17:46400536-46401906	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
7	nsv575471	chr17:46400536-46402020	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
8	nsv575472	chr17:46400536-46402160	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
9	nsv575473	chr17:46400536-46402212	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
10	nsv575474	chr17:46400536-46406546	Weak transcription Strong transcription Enhancers Bivalent Enhancer Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
11	nsv575475	chr17:46400631-46401318	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
12	nsv575476	chr17:46400631-46402212	Strong transcription Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
13	nsv575477	chr17:46400653-46401906	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
14	nsv575478	chr17:46400653-46402212	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
15	nsv575479	chr17:46400903-46402212	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:46373200-46415000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr17:46375800-46415800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr17:46377200-46421000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
4	chr17:46386200-46407800	Weak transcription	Primary T helper cells fromperipheralblood	blood
5	chr17:46390200-46429400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr17:46391000-46410400	Weak transcription	GM12878-XiMat	blood
7	chr17:46391000-46420200	Weak transcription	Primary B cells from peripheral blood	blood
8	chr17:46391200-46421200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
9	chr17:46391400-46405800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
10	chr17:46394600-46405400	Weak transcription	Primary T helper cells PMA-I stimulated	--
11	chr17:46395200-46402800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
12	chr17:46396200-46406200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
13	chr17:46396200-46421200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
14	chr17:46396800-46414400	Weak transcription	Primary T cells from cord blood	blood
15	chr17:46398600-46407600	Weak transcription	Primary T cells fromperipheralblood	blood
16	chr17:46399800-46405800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
17	chr17:46400800-46405600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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