Variant report

Variant rs188758546
Chromosome Location chr1:10704902-10704903
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10651600-10715800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:10691600-10706000 Weak transcription Dnd41 blood
3 chr1:10697400-10722000 Strong transcription Sigmoid Colon Sigmoid Colon
4 chr1:10698200-10713600 Weak transcription Small Intestine intestine
5 chr1:10698600-10705600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:10698800-10726400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr1:10699000-10712400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:10699000-10713600 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr1:10699000-10714000 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr1:10699000-10723000 Weak transcription Psoas Muscle Psoas
12 chr1:10699400-10709600 Strong transcription Duodenum Mucosa Duodenum
13 chr1:10699400-10709800 Strong transcription Colonic Mucosa Colon
14 chr1:10700000-10706200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:10700000-10707600 Weak transcription Primary T cells from cord blood blood
16 chr1:10700200-10708600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:10700200-10709400 Weak transcription H9 Cell Line embryonic stem cell
18 chr1:10700400-10722800 Weak transcription Ovary ovary
19 chr1:10701000-10706200 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr1:10701200-10705600 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr1:10701200-10706200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr1:10701200-10706200 Weak transcription Right Atrium heart
23 chr1:10701400-10708600 Weak transcription Adipose Nuclei Adipose
24 chr1:10701400-10708800 Weak transcription Brain Germinal Matrix brain
25 chr1:10701400-10709400 Strong transcription Rectal Mucosa Donor 31 rectum
26 chr1:10701600-10705400 Strong transcription Liver Liver
27 chr1:10701600-10709400 Strong transcription Rectal Mucosa Donor 29 rectum
28 chr1:10701600-10709800 Strong transcription Pancreas Pancrea
29 chr1:10701800-10706200 Strong transcription Left Ventricle heart
30 chr1:10701800-10708200 Strong transcription Aorta Aorta
31 chr1:10701800-10709400 Strong transcription Fetal Intestine Small intestine
32 chr1:10702000-10706400 Strong transcription Thymus Thymus
33 chr1:10702200-10706200 Strong transcription Gastric stomach
34 chr1:10702200-10706200 Strong transcription Right Ventricle heart
35 chr1:10702200-10709800 Strong transcription Fetal Intestine Large intestine
36 chr1:10702600-10706600 Strong transcription Fetal Adrenal Gland Adrenal Gland
37 chr1:10702600-10707200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr1:10702600-10721600 Strong transcription Skeletal Muscle Female skeletal muscle
39 chr1:10703000-10706200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:10703000-10706400 Strong transcription Primary B cells from peripheral blood blood
41 chr1:10703000-10706400 Strong transcription Primary T cells fromperipheralblood blood
42 chr1:10703200-10705200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:10703200-10705200 Enhancers NHEK skin
44 chr1:10703200-10707800 Strong transcription Duodenum Smooth Muscle Duodenum
45 chr1:10703400-10705200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:10703400-10705400 Enhancers HMEC breast
47 chr1:10703400-10706200 Strong transcription Spleen Spleen
48 chr1:10703400-10706600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr1:10703400-10706800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr1:10703400-10707800 Strong transcription Colon Smooth Muscle Colon

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