Variant report

Variant	rs188877990
Chromosome Location	chr6:133949700-133949701
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019267	chr6:133912335-133975187	Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3474268	chr6:133949576-133950635	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
3	esv3474269	chr6:133949576-133950635	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
4	esv10527	chr6:133949701-133950467	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133944400-133951800	Weak transcription	NH-A	brain
2	chr6:133944400-133962000	Weak transcription	Fetal Kidney	kidney
3	chr6:133944600-133952400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr6:133945200-133952000	Weak transcription	A549	lung
5	chr6:133945200-133952400	Weak transcription	NHDF-Ad	bronchial
6	chr6:133945400-133952400	Weak transcription	Ovary	ovary
7	chr6:133945800-133952000	Weak transcription	Osteobl	bone
8	chr6:133945800-133952400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr6:133946200-133950800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr6:133948400-133951600	Weak transcription	Fetal Lung	lung
11	chr6:133948600-133951200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr6:133949000-133949800	Enhancers	Hela-S3	cervix
13	chr6:133949600-133952400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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