Variant report

Variant rs188941887
Chromosome Location chr6:53601272-53601273
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:53596000-53601600 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr6:53596000-53605600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr6:53597200-53604000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr6:53598400-53601400 Enhancers Fetal Intestine Small intestine
5 chr6:53598400-53603000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr6:53598600-53601400 Enhancers Fetal Intestine Large intestine
7 chr6:53599200-53603000 Enhancers Fetal Heart heart
8 chr6:53599400-53602200 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr6:53599400-53602600 Enhancers HSMMtube muscle
10 chr6:53599800-53601400 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr6:53599800-53601600 Enhancers Primary hematopoietic stem cells blood
12 chr6:53599800-53602800 Enhancers Brain Germinal Matrix brain
13 chr6:53599800-53603000 Enhancers HUVEC blood vessel
14 chr6:53599800-53603200 Enhancers NHEK skin
15 chr6:53599800-53606200 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr6:53600000-53601400 Enhancers Hela-S3 cervix
17 chr6:53600000-53605800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr6:53600400-53601400 Weak transcription NH-A brain
19 chr6:53600400-53601800 Weak transcription Muscle Satellite Cultured Cells --
20 chr6:53600800-53602000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr6:53600800-53602000 Weak transcription Placenta Amnion Placenta Amnion
22 chr6:53600800-53602000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr6:53600800-53603600 Enhancers Dnd41 blood
24 chr6:53600800-53606200 Weak transcription Primary T cells fromperipheralblood blood
25 chr6:53601000-53601800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr6:53601000-53602000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr6:53601000-53602200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr6:53601000-53602200 Weak transcription HMEC breast
29 chr6:53601000-53602600 Weak transcription Placenta Placenta
30 chr6:53601000-53606000 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr6:53601000-53606200 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr6:53601200-53601600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr6:53601200-53602000 Weak transcription Duodenum Mucosa Duodenum
34 chr6:53601200-53602000 Weak transcription Fetal Thymus thymus
35 chr6:53601200-53605800 Weak transcription Primary T cells from cord blood blood
36 chr6:53601200-53605800 Weak transcription Thymus Thymus
37 chr6:53601200-53606000 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr6:53601200-53606000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr6:53601200-53606000 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr6:53601200-53606000 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr6:53601200-53606200 Weak transcription Primary T killer memory cells from peripheral blood blood

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