Variant report

Variant	rs188982111
Chromosome Location	chr20:22451379-22451380
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3428094	chr20:22450900-22453266	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22446400-22451600	Weak transcription	Gastric	stomach
2	chr20:22448200-22452000	Weak transcription	Pancreas	Pancrea
3	chr20:22448200-22452000	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr20:22448400-22451400	Enhancers	HepG2	liver
5	chr20:22450000-22452200	Weak transcription	K562	blood
6	chr20:22450400-22452400	Enhancers	Liver	Liver
7	chr20:22450800-22451600	Enhancers	Pancreatic Islets	Pancreatic Islet
8	chr20:22450800-22452400	Flanking Active TSS	A549	lung
9	chr20:22451200-22452800	Enhancers	Stomach Mucosa	stomach

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links