Variant report

Variant	rs188985737
Chromosome Location	chr5:35841129-35841130
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022761	chr5:35775802-35902546	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv3379714	chr5:35841120-35843568	Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35839000-35841800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
2	chr5:35839000-35842000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
3	chr5:35840000-35841200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr5:35840000-35841600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
5	chr5:35840000-35841600	Enhancers	Primary T killer memory cells from peripheral blood	blood
6	chr5:35840200-35841200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr5:35840800-35841400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
8	chr5:35840800-35841800	Enhancers	Primary T helper cells PMA-I stimulated	--
9	chr5:35841000-35841200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links