The 2.0 version of rSNPBase

Variant report

Variant rs188993655
Chromosome Location chr11:16024136-16024137
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:16004800-16024600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr11:16011000-16033800 Weak transcription Left Ventricle heart
3 chr11:16021200-16025400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
4 chr11:16021400-16024200 Enhancers NH-A brain
5 chr11:16022600-16024800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr11:16022800-16024400 Enhancers Primary neutrophils fromperipheralblood blood
7 chr11:16022800-16024400 Enhancers Fetal Intestine Large intestine
8 chr11:16022800-16024400 Enhancers Fetal Intestine Small intestine
9 chr11:16022800-16024800 Enhancers HepG2 liver
10 chr11:16022800-16025000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr11:16023000-16024200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr11:16023000-16024200 Flanking Active TSS Muscle Satellite Cultured Cells --
13 chr11:16023000-16024200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr11:16023000-16024400 Enhancers Fetal Stomach stomach
15 chr11:16023000-16024400 Enhancers Ovary ovary
16 chr11:16023000-16025000 Enhancers Cortex derived primary cultured neurospheres brain
17 chr11:16023200-16024400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr11:16023200-16024400 Enhancers Liver Liver
19 chr11:16023200-16025000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
20 chr11:16023400-16024200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
21 chr11:16023400-16035400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr11:16023600-16024200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr11:16023600-16024200 Active TSS Pancreatic Islets Pancreatic Islet
24 chr11:16023600-16024400 Enhancers Brain Germinal Matrix brain
25 chr11:16023600-16025200 Enhancers Fetal Heart heart
26 chr11:16023600-16025200 Enhancers Skeletal Muscle Female skeletal muscle
27 chr11:16023800-16024400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr11:16023800-16024400 Enhancers HMEC breast
29 chr11:16023800-16024400 Enhancers NHDF-Ad bronchial
30 chr11:16023800-16024600 Weak transcription Psoas Muscle Psoas
31 chr11:16023800-16025000 Enhancers Fetal Lung lung
32 chr11:16023800-16027600 Weak transcription K562 blood
33 chr11:16023800-16027800 Weak transcription Duodenum Mucosa Duodenum
34 chr11:16023800-16029200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr11:16023800-16033200 Weak transcription Fetal Muscle Leg muscle
36 chr11:16023800-16033800 Weak transcription Small Intestine intestine
37 chr11:16023800-16035000 Weak transcription Brain Substantia Nigra brain
38 chr11:16023800-16050400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr11:16024000-16024200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr11:16024000-16024200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr11:16024000-16024200 Enhancers A549 lung
42 chr11:16024000-16024400 Enhancers Hela-S3 cervix
43 chr11:16024000-16024400 Enhancers NHLF lung
44 chr11:16024000-16024800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr11:16024000-16024800 Enhancers Osteobl bone

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Last update: Aug 31, 2015