Variant report

Variant	rs189009496
Chromosome Location	chrX:122607283-122607284
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869296	chrX:122602829-122716872	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv532913	chrX:122603383-122723979	Weak transcription Enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:122583800-122614200	Weak transcription	Brain Germinal Matrix	brain
2	chrX:122599000-122610400	Weak transcription	Brain Angular Gyrus	brain
3	chrX:122599400-122610000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chrX:122601000-122614800	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chrX:122602600-122610000	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chrX:122604400-122615200	Weak transcription	Fetal Brain Female	brain
7	chrX:122605000-122615400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chrX:122607000-122607400	Enhancers	HMEC	breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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