Variant report

Variant	rs189029964
Chromosome Location	chr14:32364177-32364178
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv564180	chr14:31958566-32368934	Strong transcription Enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv564182	chr14:32110519-32584337	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
3	nsv1046526	chr14:32110537-32567426	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
4	nsv526200	chr14:32308511-32454372	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
5	nsv519917	chr14:32363980-32375359	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:58 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32354400-32364600	Weak transcription	HSMM	muscle
2	chr14:32358800-32366600	Weak transcription	Fetal Brain Female	brain
3	chr14:32360600-32365000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr14:32360600-32365200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:32360800-32365200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr14:32361000-32365200	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr14:32361200-32364800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr14:32361400-32365200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr14:32362000-32365200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr14:32362200-32365200	Enhancers	Stomach Mucosa	stomach
11	chr14:32362400-32364200	Enhancers	Lung	lung
12	chr14:32362400-32364200	Enhancers	NHEK	skin
13	chr14:32362400-32364800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
14	chr14:32362400-32365000	Enhancers	Brain Cingulate Gyrus	brain
15	chr14:32362400-32365200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr14:32362400-32365200	Enhancers	Brain Hippocampus Middle	brain
17	chr14:32362400-32365200	Enhancers	HMEC	breast
18	chr14:32362600-32364200	Weak transcription	NHLF	lung
19	chr14:32362600-32364400	Enhancers	Primary B cells from peripheral blood	blood
20	chr14:32362600-32365000	Enhancers	Fetal Stomach	stomach
21	chr14:32362600-32365200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr14:32362600-32365600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr14:32362800-32364200	Weak transcription	Sigmoid Colon	Sigmoid Colon
24	chr14:32362800-32364200	Weak transcription	Osteobl	bone
25	chr14:32363000-32364200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
26	chr14:32363000-32364200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
27	chr14:32363000-32364200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr14:32363000-32364400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr14:32363000-32364800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr14:32363000-32366800	Weak transcription	Fetal Lung	lung
31	chr14:32363200-32364200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr14:32363200-32364200	Flanking Active TSS	K562	blood
33	chr14:32363200-32364600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
34	chr14:32363200-32365600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr14:32363200-32366200	Weak transcription	Left Ventricle	heart
36	chr14:32363400-32364400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
37	chr14:32363400-32364600	Enhancers	Spleen	Spleen
38	chr14:32363400-32365200	Enhancers	Placenta Amnion	Placenta Amnion
39	chr14:32363600-32364200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr14:32363600-32364400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr14:32363600-32364600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr14:32363600-32364600	Weak transcription	Fetal Kidney	kidney
43	chr14:32363600-32365000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr14:32363800-32364400	Enhancers	HUES6 Cell Line	embryonic stem cell
45	chr14:32363800-32364400	Enhancers	Right Ventricle	heart
46	chr14:32363800-32365200	Enhancers	HUES64 Cell Line	embryonic stem cell
47	chr14:32363800-32365200	Enhancers	NH-A	brain
48	chr14:32363800-32366400	Weak transcription	Brain Germinal Matrix	brain
49	chr14:32363800-32367000	Weak transcription	Fetal Heart	heart
50	chr14:32364000-32364200	Enhancers	Placenta	Placenta

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