Variant report

Variant	rs189218919
Chromosome Location	chr11:121449063-121449064
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv975233	chr11:121359656-121574786	Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv527072	chr11:121448090-121486552	Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121407200-121459000	Weak transcription	Colon Smooth Muscle	Colon
2	chr11:121414000-121452400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr11:121416400-121451800	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr11:121416600-121471800	Strong transcription	Primary T cells from cord blood	blood
5	chr11:121417000-121452400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
6	chr11:121417600-121452400	Strong transcription	Primary T helper cells fromperipheralblood	blood
7	chr11:121418000-121451800	Strong transcription	Primary T helper cells PMA-I stimulated	--
8	chr11:121425000-121456800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr11:121428200-121451400	Strong transcription	Primary T cells fromperipheralblood	blood
10	chr11:121431000-121466400	Weak transcription	Ovary	ovary
11	chr11:121432800-121450000	Weak transcription	Aorta	Aorta
12	chr11:121434400-121451200	Strong transcription	Primary T killer naive cells fromperipheralblood	blood
13	chr11:121434600-121453200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr11:121434800-121451800	Strong transcription	Primary T helper naive cells from peripheral blood	blood
15	chr11:121435200-121464800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
16	chr11:121436200-121450400	Strong transcription	Duodenum Mucosa	Duodenum
17	chr11:121437600-121449600	Strong transcription	HUES64 Cell Line	embryonic stem cell
18	chr11:121437800-121449600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
19	chr11:121437800-121450000	Strong transcription	H1 Cell Line	embryonic stem cell
20	chr11:121437800-121453600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr11:121438200-121451200	Strong transcription	HepG2	liver
22	chr11:121438400-121453600	Weak transcription	Colonic Mucosa	Colon
23	chr11:121439000-121449200	Weak transcription	Pancreatic Islets	Pancreatic Islet
24	chr11:121440600-121449800	Strong transcription	Dnd41	blood
25	chr11:121440600-121450400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
26	chr11:121440600-121450800	Strong transcription	Primary T helper memory cells from peripheral blood 2	blood
27	chr11:121440600-121485000	Strong transcription	HUES48 Cell Line	embryonic stem cell
28	chr11:121440800-121450200	Strong transcription	H9 Cell Line	embryonic stem cell
29	chr11:121440800-121450200	Strong transcription	Rectal Mucosa Donor 29	rectum
30	chr11:121440800-121452000	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
31	chr11:121441400-121449800	Genic enhancers	Brain Hippocampus Middle	brain
32	chr11:121441400-121451400	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
33	chr11:121442200-121456800	Weak transcription	Esophagus	oesophagus
34	chr11:121442600-121451000	Strong transcription	Stomach Smooth Muscle	stomach
35	chr11:121443000-121455000	Strong transcription	HUES6 Cell Line	embryonic stem cell
36	chr11:121443200-121450200	Strong transcription	NHEK	skin
37	chr11:121443200-121452000	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr11:121443400-121450000	Strong transcription	Primary T killer memory cells from peripheral blood	blood
39	chr11:121443400-121464600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr11:121443800-121450200	Enhancers	Fetal Brain Female	brain
41	chr11:121443800-121456800	Weak transcription	Lung	lung
42	chr11:121443800-121458600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr11:121443800-121461600	Weak transcription	Pancreas	Pancrea
44	chr11:121444400-121450800	Strong transcription	Primary T helper memory cells from peripheral blood 1	blood
45	chr11:121444400-121452200	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr11:121444800-121450000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
47	chr11:121445000-121449200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
48	chr11:121445000-121450000	Genic enhancers	Monocytes-CD14+_RO01746	blood
49	chr11:121445000-121450200	Genic enhancers	Primary monocytes fromperipheralblood	blood
50	chr11:121445000-121450200	Strong transcription	Thymus	Thymus

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